RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DEFB103AP81534 67 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRKCDQ05655 676 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GANABQ14697 944 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 TEAD2Q15562 447 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TOR1AIP1Q5JTV8 583 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 SPANXN2Q5MJ10 180 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 FAM71E1Q6IPT2 247 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PNCKQ6P2M8 343 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 NXPE4Q6UWF7 544 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 LIPIQ6XZB0 460 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PTCHD4Q6ZW05 846 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ARMCX6Q7L4S7 300 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 TSEN54Q7Z6J9 526 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 METTL4Q8N3J2 472 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 AQP11Q8NBQ7 271 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 B3GNT7Q8NFL0 401 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 OR9Q2Q8NGE9 314 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 WDR48Q8TAF3 677 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.34
TDP1-213ENST00000555880 SORCS1Q8WY21 1168 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 OTUB2Q96DC9 234 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 DTD2Q96FN9 168 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ABHD8Q96I13 439 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PAWRQ96IZ0 340 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 Q96MT0 163 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 NIPSNAP1Q9BPW8 284 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CHCHD6Q9BRQ6 235 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 OR2AG1Q9H205 316 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 RC3H2Q9HBD1 1191 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 C1GALT1Q9NS00 363 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ZNF226Q9NYT6 803 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CNOT2Q9NZN8 540 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 SPATA7Q9P0W8 599 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 EXO1Q9UQ84 846 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 KLK4Q9Y5K2 254 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CCDC88CQ9P219 2028 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 SLC9A3R1O14745 358 aaPredicted RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 TBX1O43435 398 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PDE9AO76083 593 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PTHP01270 115 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 APOA1P02647 267 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRNPP04156 253 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CTSLP07711 333 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 IL3P08700 152 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GABRB1P18505 474 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 POU1F1P28069 291 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 WEE1P30291 646 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GJA8P48165 433 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ALDH9A1P49189 494 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 HMGA2P52926 109 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 UGT2B15P54855 530 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 MC1RQ01726 317 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GRIN2CQ14957 1233 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PTGES3Q15185 160 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 MED22Q15528 200 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 INAVAQ3KP66 663 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 SPDYE7PQ495Y7 208 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRAMEF13Q5VWM6 474 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 RAET1GQ6H3X3 334 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TMIGD1Q6UXZ0 262 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PARS2Q7L3T8 475 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 AKAP14Q86UN6 197 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TRIM69Q86WT6 500 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 KRT73Q86Y46 540 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 LYSMD2Q8IV50 215 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 NATD1Q8N6N6 113 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 POC5Q8NA72 575 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 FAM46DQ8NEK8 389 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 SETD7Q8WTS6 366 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 MYLIPQ8WY64 445 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 NUS1Q96E22 293 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CEP19Q96LK0 163 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CDCA4Q9BXL8 241 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ROGDIQ9GZN7 287 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 NXF2Q9GZY0 626 aaKnown RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 TRIM39Q9HCM9 518 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 POLE4Q9NR33 117 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ACER3Q9NUN7 267 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TMEM184CQ9NVA4 438 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 HCFC1R1Q9NWW0 138 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 SCHIP1Q9P0W5 487 aaPredicted RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 ANKMY1Q9P2S6 941 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CRNNQ9UBG3 495 aaPredicted RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 PRKAG2Q9UGJ0 569 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 MKLN1Q9UL63 735 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 IFT52Q9Y366 437 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 GPC6Q9Y625 555 aaPredicted RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 MTCL1Q9Y4B5 1905 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 NINQ8N4C6 2090 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PRAMEF33A0A0G2JMD5 474 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms