RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 MYNNQ9NPC7 610 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 LHX9Q9NQ69 397 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 C2orf42Q9NWW7 574 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 UBAP1Q9NZ09 502 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 RAB26Q9ULW5 256 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 PCDHGB4Q9UN71 923 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 MAPRE3Q9UPY8 281 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 PCDHGB5Q9Y5G0 923 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 PLXND1Q9Y4D7 1925 aa7.43□□□□□ -1.22
LINC00641-202ENST00000555688 GOLGA4Q13439 2230 aaKnown RBP7.43□□□□□ -1.22
LINC00641-202ENST00000555688 ARHGEF17Q96PE2 2063 aaPredicted RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ARHGAP10A1A4S6 786 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 MAGEA13PA6NCF6 341 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 A6NCN8 305 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 LRRC72A6NJI9 287 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 UPK1AO00322 258 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CXCR6O00574 342 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 RNASET2O00584 256 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 PLPP1O14494 284 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SIGLEC6O43699 453 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 TPST1O60507 370 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CREG1O75629 220 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SEMA3DO95025 777 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 PRSS23O95084 383 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 KCNK5O95279 499 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CPSF4O95639 269 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 IGHV4-34P06331 123 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 LYNP07948 512 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZCCHC18P0CG32 403 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SRFP11831 508 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CXCR2P25025 360 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 AK4P27144 223 aaPredicted RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 BSGP35613 385 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 TAS2R50P59544 299 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ATP6AP1Q15904 470 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ADRM1Q16186 407 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 NRF1Q16656 503 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 INTS11Q5TA45 600 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 KHDRBS2Q5VWX1 349 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 UGT2A3Q6UWM9 527 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ENPP6Q6UWR7 440 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZBTB49Q6ZSB9 765 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZNF621Q6ZSS3 439 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 LPCAT2Q7L5N7 544 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SPRED1Q7Z699 444 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SERPINA11Q86U17 422 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 NRROSQ86YC3 692 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 PTOV1Q86YD1 416 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZDHHC13Q8IUH4 622 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ADGRF3Q8IZF5 1079 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 TNIP2Q8NFZ5 429 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 GOT1L1Q8NHS2 421 aaPredicted RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CDC26Q8NHZ8 85 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CREB3L4Q8TEY5 395 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 HMGB4Q8WW32 186 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 FAM120BQ96EK7 910 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 MSANTD3Q96H12 275 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 REXO5Q96IC2 774 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 WDR92Q96MX6 357 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 F2RL3Q96RI0 385 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SEPHS2Q99611 448 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 TRIM4Q9C037 500 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 AICDAQ9GZX7 198 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 TWSG1Q9GZX9 223 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 CHST8Q9H2A9 424 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 C6orf106Q9H6K1 298 aaPredicted RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 KIR3DX1Q9H7L2 352 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 DCAF13Q9NV06 445 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 GFOD1Q9NXC2 390 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 SPHK1Q9NYA1 384 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZNF624Q9P2J8 865 aaPredicted RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ZNF639Q9UID6 485 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 NDRG2Q9UN36 371 aaKnown RBP7.42□□□□□ -1.22
LINC00641-202ENST00000555688 HS3ST3A1Q9Y663 406 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 AP4B1Q9Y6B7 739 aa7.42□□□□□ -1.22
LINC00641-202ENST00000555688 ANKDD1BA6NHY2 528 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 PDZK1P1A8MUH7 402 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 PDLIM1O00151 329 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 SEMA4FO95754 770 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 MT-ND1P03886 318 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 RETP07949 1114 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 UBTFL6P0CB48 400 aaPredicted RBP7.41□□□□□ -1.22
LINC00641-202ENST00000555688 RAP2AP10114 183 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 FCGR1AP12314 374 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 IL1RNP18510 177 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 HPCAL1P37235 193 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 MVDP53602 400 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 YPEL5P62699 121 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 CYP4F2P78329 520 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 PHEXP78562 749 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 MRPS35P82673 323 aaKnown RBP7.41□□□□□ -1.22
LINC00641-202ENST00000555688 C2orf80Q0P641 193 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 FZD5Q13467 585 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 TDGQ13569 410 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 GK3PQ14409 553 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 C16orf72Q14CZ0 275 aa7.41□□□□□ -1.22
LINC00641-202ENST00000555688 PDK3Q15120 406 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms