RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CLDN10P78369 228 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 UPP1Q16831 310 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF461Q8TAF7 563 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 RAB8BQ92930 207 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ANKRD60Q9BZ19 345 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 TAS2R3Q9NYW6 316 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF726A6NNF4 738 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 JUPP14923 745 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 HSD11B1P28845 292 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 FXYD6P3P58550 94 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ODF4Q2M2E3 257 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 SCLYQ96I15 445 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 POLE4Q9NR33 117 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ARMC1Q9NVT9 282 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 PTGDR2Q9Y5Y4 395 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 PCDHGA12O60330 932 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 NR2C1P13056 603 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 CRISP1P54107 249 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 GNG2P59768 71 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 RAB8AP61006 207 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF252P-AS1Q0IIN9 211 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 TMEM115Q12893 351 aaPredicted RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 LIPKQ5VXJ0 399 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 STRA6Q9BX79 667 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF717Q9BY31 904 aaPredicted RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 ACTL8Q9H568 366 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 CD93Q9NPY3 652 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 SCP2D1Q9UJQ7 156 aa13.42□□□□□ -0.26
VTI1B-204ENST00000554659 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
VTI1B-204ENST00000554659 RP2O75695 350 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
VTI1B-204ENST00000554659 UQCRC1P31930 480 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 CLDN8P56748 225 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 NFATC3Q12968 1075 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 DECR1Q16698 335 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 BPNT1O95861 308 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 C8orf89P0DMQ9 161 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 C1GALT1C1LP0DN25 315 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 CELP19835 753 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 SUSD1Q6UWL2 747 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 SAMD12Q8N8I0 201 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 OR51G2Q8NGK0 314 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 NPLOC4Q8TAT6 608 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 THEM6Q8WUY1 208 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 CCDC32Q9BV29 185 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 NANSQ9NR45 359 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
VTI1B-204ENST00000554659 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 A6NHS1 94 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 SOBPA7XYQ1 873 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 G3V2L1 256 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 KIAA0513O60268 411 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 ZNF14P17017 642 aaPredicted RBP13.41□□□□□ -0.26
VTI1B-204ENST00000554659 RHCEP18577 417 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 DCKP27707 260 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 HNF1BP35680 557 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 ETV4P43268 484 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 CD47Q08722 323 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 RPL13AP3Q6NVV1 102 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 BAIAP2L2Q6UXY1 529 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 AVL9Q8NBF6 648 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 HSPA12BQ96MM6 686 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 RANBP3Q9H6Z4 567 aaPredicted RBP13.41□□□□□ -0.26
VTI1B-204ENST00000554659 FZD9O00144 591 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 BEST1O76090 585 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 IL3P08700 152 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 TYRP14679 529 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 MAGEA8P43361 318 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 CD97P48960 835 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 PON2Q15165 354 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 LRRC37A5PQ49AS3 106 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 ARSKQ6UWY0 536 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 ITPKCQ96DU7 683 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 MOCOSQ96EN8 888 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 HERPUD2Q9BSE4 406 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 TMEM45AQ9NWC5 275 aa13.41□□□□□ -0.26
VTI1B-204ENST00000554659 GOLGA4Q13439 2230 aaKnown RBP13.41□□□□□ -0.26
VTI1B-204ENST00000554659 IL7P13232 177 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 RPL10P27635 214 aaKnown RBP13.4□□□□□ -0.26
VTI1B-204ENST00000554659 ACTC1P68032 377 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 ACTA1P68133 377 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 SLC25A25Q6KCM7 469 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 SLC44A3Q8N4M1 653 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 OR2T33Q8NG76 320 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 FCAMRQ8WWV6 532 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 PARPBPQ9NWS1 579 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 GRHPRQ9UBQ7 328 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 ATPIF1Q9UII2 106 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 ERVK-11Q9UQG0 969 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 PCDHB14Q9Y5E9 798 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 NPIPA5E9PKD4 350 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 PLD2O14939 933 aa13.4□□□□□ -0.26
VTI1B-204ENST00000554659 ITGA5P08648 1049 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms