RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MMP25Q9NPA2 562 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 SLCO1B3Q9NPD5 702 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 C20orf96Q9NUD7 363 aaPredicted RBP8.3□□□□□ -1.08
TDP1-208ENST00000553989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.08
TDP1-208ENST00000553989 LRFN1Q9P244 771 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 TRMT6Q9UJA5 497 aaKnown RBP8.3□□□□□ -1.08
TDP1-208ENST00000553989 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 CHMP2BQ9UQN3 213 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 NAALAD2Q9Y3Q0 740 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 PCDHGB6Q9Y5F9 930 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 MAD1L1Q9Y6D9 718 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 HEATR5BQ9P2D3 2071 aa8.3□□□□□ -1.08
TDP1-208ENST00000553989 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 WDR91A4D1P6 747 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 ASPDHA6ND91 283 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 TRIM49D1C9J1S8 452 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 GFYI3L273 518 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 NDUFS4O43181 175 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 ZNHIT1O43257 154 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 ASNA1O43681 348 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 MAN1A2O60476 641 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SP1P08047 785 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 HIST1H2AGP0C0S8 130 aaPredicted RBP8.29□□□□□ -1.08
TDP1-208ENST00000553989 CDH1P12830 882 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 GNAZP19086 355 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 HIST1H2ADP20671 130 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 IL10P22301 178 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 JAK1P23458 1154 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 CYB561P49447 251 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 RGS4P49798 205 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SLC26A5P58743 744 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 CSNK1G2P78368 415 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 OLR1P78380 273 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 MPP1Q00013 466 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 TLE4Q04727 773 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 NAE1Q13564 534 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 FRG1Q14331 258 aaKnown RBP8.29□□□□□ -1.08
TDP1-208ENST00000553989 HERC3Q15034 1050 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 LRRC8EQ6NSJ5 796 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 UGT3A1Q6NUS8 523 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 H3F3CQ6NXT2 135 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 MBOAT1Q6ZNC8 495 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 Q6ZPB1 254 aaPredicted RBP8.29□□□□□ -1.08
TDP1-208ENST00000553989 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 CDH24Q86UP0 819 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 RPS19BP1Q86WX3 136 aaKnown RBP8.29□□□□□ -1.08
TDP1-208ENST00000553989 PDSS2Q86YH6 399 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 CTAGE3PQ8IX95 158 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
TDP1-208ENST00000553989 LRRC56Q8IYG6 542 aaPredicted RBP8.29□□□□□ -1.08
TDP1-208ENST00000553989 MYO1HQ8N1T3 1032 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 PPM1NQ8N819 430 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 FAM13CQ8NE31 585 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 OR5T3Q8NGG3 340 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 HIST1H2AHQ96KK5 128 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SIGLEC10Q96LC7 697 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 CCDC138Q96M89 665 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 OR1F2PQ96R84 312 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 HIST1H2AJQ99878 128 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 H2AFJQ9BTM1 129 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 NPHS2Q9NP85 383 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 THAP1Q9NVV9 213 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 COQ3Q9NZJ6 369 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 KLHL42Q9P2K6 505 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 SH2B3Q9UQQ2 575 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 DHRS7Q9Y394 339 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 L3MBTL1Q9Y468 752 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 COMMD10Q9Y6G5 202 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 PKDREJQ9NTG1 2253 aa8.29□□□□□ -1.08
TDP1-208ENST00000553989 KCNE1BA0A087WTH5 132 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 A0A0G2JND7 137 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 FAM159BA6NKW6 160 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 MAGEB17A8MXT2 336 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 PSMD12O00232 456 aaPredicted RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 FCHO1O14526 889 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 TFECO14948 347 aaPredicted RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 OR1F1O43749 312 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 CDC40O60508 579 aaKnown RBP eCLIP8.28□□□□□ -1.08
TDP1-208ENST00000553989 PRMT3O60678 531 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 B4GALT2O60909 372 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 NEURL1O76050 574 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 TPOP07202 933 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 C8GP07360 202 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 FHP07954 510 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 GRK2P25098 689 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 TPP2P29144 1249 aaPredicted RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 MAGEA3P43357 314 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 KIR3DL1P43629 444 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 RAP1GDS1P52306 607 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 MEF2AQ02078 507 aaPredicted RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 RHAGQ02094 409 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 RGS1Q08116 209 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 STX3Q13277 289 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 SP140Q13342 867 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 CDSNQ15517 529 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 DNAL1Q4LDG9 190 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 DEFB134Q4QY38 66 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms