RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 DUSP10Q9Y6W6 482 aa6.77□□□□□ -1.33
ATXN3-219ENST00000553488 TCRBV16S1A1N1A0A5B0 115 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 GOLGA6L9A6NEM1 432 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 AKR1B15C9JRZ8 316 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 H3BMM5 538 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 KLRC4-KLRK1H3BQV0 150 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 GFYI3L273 518 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 FCHO1O14526 889 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 LCMT2O60294 686 aaKnown RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 GALR3O60755 368 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 IGHG3P01860 377 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 GLI4P10075 376 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ETS1P14921 441 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 DNASE1P24855 282 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 HRH2P25021 359 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ACVR2AP27037 513 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 GIPRP48546 466 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 OLR1P78380 273 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ACTN3Q08043 901 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 CUL1Q13616 776 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 SNTB1Q13884 538 aaKnown RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 RPS6KA1Q15418 735 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 MLANAQ16655 118 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 RNF187Q5TA31 235 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 QSOX2Q6ZRP7 698 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 CENPUQ71F23 418 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ASPGQ86U10 573 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 SLC26A11Q86WA9 606 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 CDC20BQ86Y33 519 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 CAMKVQ8NCB2 501 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF740Q8NDX6 193 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 OR5M3Q8NGP4 307 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 TBC1D20Q96BZ9 403 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 MFSD3Q96ES6 412 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 PANX2Q96RD6 677 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 TTYH2Q9BSA4 534 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 ABCF3Q9NUQ8 709 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 PACSIN2Q9UNF0 486 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 PPIEQ9UNP9 301 aaKnown RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 REXO2Q9Y3B8 237 aaKnown RBP6.76□□□□□ -1.33
ATXN3-219ENST00000553488 EXPH5Q8NEV8 1989 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 MED12Q93074 2177 aa6.76□□□□□ -1.33
ATXN3-219ENST00000553488 A0A1B0GVC2 190 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 OR14I1A6ND48 311 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 A6NNC1 897 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 BTNL10A8MVZ5 291 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 GOLGA8KD6RF30 607 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 E7EVH7 732 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 NPIPA2E9PIF3 369 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 NPIPA3F8WFD2 350 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 GOLGA8TH3BQL2 631 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 LIASO43766 372 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 PRKNO60260 465 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 ITGA10O75578 1167 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 PDE9AO76083 593 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 GLSO94925 669 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 IFNB1P01574 187 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 APRTP07741 180 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 F7P08709 466 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SLC35G6P0C7Q6 338 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 MPC1LP0DKB6 136 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 OGNP20774 298 aaKnown RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 MAOAP21397 527 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 JAK1P23458 1154 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CETN2P41208 172 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 ZFP36L2P47974 494 aaKnown RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SESN2P58004 480 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 BTG2P78543 158 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CHRNEQ04844 493 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 HERC3Q15034 1050 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SLC25A35Q3KQZ1 300 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 GXYLT1Q4G148 440 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 THEMIS2Q5TEJ8 643 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 TMEM198Q66K66 360 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 KIAA0930Q6ICG6 404 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CAPN13Q6MZZ7 669 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 MRNIPQ6NTE8 343 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 ARSKQ6UWY0 536 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 B3GNT6Q6ZMB0 384 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CYHR1Q6ZMK1 362 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 KIAA0408Q6ZU52 694 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 Q71RC1 249 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 CAMKMTQ7Z624 323 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 OTUD6BQ8N6M0 293 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 PRELID2Q8N945 189 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 MFSD9Q8NBP5 474 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 RELL2Q8NC24 303 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-219ENST00000553488 PSD4Q8NDX1 1056 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 MYRIPQ8NFW9 859 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SLC13A3Q8WWT9 602 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SMC6Q96SB8 1091 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SH3GL2Q99962 352 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 SARGQ9BW04 601 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 KIFC1Q9BW19 673 aa6.75□□□□□ -1.33
ATXN3-219ENST00000553488 TTTY12Q9BZ98 90 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms