RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 A0A0J9YVX5 310 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 H0YGG7 62 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 CLOCKO15516 846 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 TIPRLO75663 272 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SLITRK5O94991 958 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SOX30O94993 753 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 NTRK1P04629 796 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SMIM10L1P0DMW3 83 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ALPPL2P10696 532 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 UQCRBP14927 111 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ALOX12P18054 663 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 PEX2P28328 305 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 GPC1P35052 558 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 HOXD12P35452 270 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ARHGDIAP52565 204 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-215ENST00000547672 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF385BQ569K4 471 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 TMEM64Q6YI46 380 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 RNF111Q6ZNA4 994 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 VN1R4Q7Z5H5 301 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ZZZ3Q8IYH5 903 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 OR8K5Q8NH50 307 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SFXN5Q8TD22 340 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ADAMTS18Q8TE60 1221 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 PATE1Q8WXA2 126 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 EXOSC8Q96B26 276 aaKnown RBP12.75□□□□□ -0.37
PTCH1-215ENST00000547672 NEURL3Q96EH8 262 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SLC47A1Q96FL8 570 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 AURKBQ96GD4 344 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SMIM10Q96HG1 83 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 AHCYL2Q96HN2 611 aaKnown RBP12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SEPHS2Q99611 448 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 TRIM8Q9BZR9 551 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 IKZF5Q9H5V7 419 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SLC6A13Q9NSD5 602 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 DLGAP2Q9P1A6 1054 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 DNAJB9Q9UBS3 223 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 ANGPT4Q9Y264 503 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 SNX8Q9Y5X2 465 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 COL6A3P12111 3177 aa12.75□□□□□ -0.37
PTCH1-215ENST00000547672 CEP192Q8TEP8 1941 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 RNF103-CHMP3A0A140T963 221 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 GNGT2O14610 69 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 NUDT21O43809 227 aaKnown RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 NOBOXO60393 691 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PDE9AO76083 593 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 SERPINA1P01009 418 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CELA2BP08218 269 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF888P0CJ79 500 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 NR2F6P10588 404 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TYRP1P17643 537 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 BCKDHBP21953 392 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CPN2P22792 545 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 SOAT1P35610 550 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CAPZBP47756 277 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CCT3P49368 545 aaKnown RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 MAPK10P53779 464 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 EMP3P54852 163 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 RAB8AP61006 207 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 GPLD1P80108 840 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PRR5P85299 388 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TP53BP2Q13625 1128 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TCTE1Q5JU00 501 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 OR52E8Q6IFG1 317 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 IRGCQ6NXR0 463 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 SLC48A1Q6P1K1 146 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 EIF3MQ7L2H7 374 aaKnown RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 GPR155Q7Z3F1 870 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PATL1Q86TB9 770 aaKnown RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TRIM73Q86UV7 250 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 SVOPLQ8N434 492 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CSNK1A1LQ8N752 337 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 OR56A1Q8NGH5 318 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 RASSF5Q8WWW0 418 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TANKQ92844 425 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 CIDECQ96AQ7 238 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 OSBPL11Q9BXB4 747 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 BATF3Q9NR55 127 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 PLCL2Q9UPR0 1127 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 KLHL20Q9Y2M5 609 aa12.74□□□□□ -0.37
PTCH1-215ENST00000547672 ARHGEF17Q96PE2 2063 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-215ENST00000547672 A0A1W2PR48 441 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 TLCD2A6NGC4 264 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 MYO1GB0I1T2 1018 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 C5orf58C9J3I9 102 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 PPM1DO15297 605 aa12.73□□□□□ -0.37
PTCH1-215ENST00000547672 SUV39H1O43463 412 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms