RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RAP2CQ9Y3L5 183 aa19.27■□□□□ 0.67
HMGA2-211ENST00000545998 ATG4BQ9Y4P1 393 aa19.27■□□□□ 0.67
HMGA2-211ENST00000545998 PRMT3O60678 531 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 C8orf89P0DMQ9 161 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 IMPG1Q17R60 797 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 SPIN4Q56A73 249 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 ATG16L1Q676U5 607 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 OR11G2Q8NGC1 345 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 TSLPQ969D9 159 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 C8orf44Q96CB5 159 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 ILKAPQ9H0C8 392 aaPredicted RBP19.26■□□□□ 0.67
HMGA2-211ENST00000545998 MANSC1Q9H8J5 431 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 PHF11Q9UIL8 331 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 MRPS33Q9Y291 106 aaKnown RBP19.26■□□□□ 0.67
HMGA2-211ENST00000545998 MMACHCQ9Y4U1 282 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 KCNMB2Q9Y691 235 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 SPACA6W5XKT8 324 aa19.26■□□□□ 0.67
HMGA2-211ENST00000545998 LOC102723996A0A087X1L8 192 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 A0A1W2PQ72 361 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 NPIPB8E9PQR5 432 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 SLC28A1O00337 649 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PEX12O00623 359 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PIP5K1BO14986 540 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PROM1O43490 865 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 RSL1D1O76021 490 aaKnown RBP19.25■□□□□ 0.67
HMGA2-211ENST00000545998 ITGB2P05107 769 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 LINC00032P0C843 101 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 MAOAP21397 527 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 CPN2P22792 545 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PRPH2P23942 346 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 RAE1P78406 368 aaKnown RBP19.25■□□□□ 0.67
HMGA2-211ENST00000545998 NSDHLQ15738 373 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 TBR1Q16650 682 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 SPDYAQ5MJ70 313 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 CCNYL2Q5T2Q4 361 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 Q6ZSR9 355 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 LANCL3Q6ZV70 420 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 SCUBE1Q8IWY4 988 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 EFCAB3Q8N7B9 438 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 OR2T11Q8NH01 316 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 METTL21AQ8WXB1 218 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PTCHD1Q96NR3 888 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 PRDM9Q9NQV7 894 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 THAP1Q9NVV9 213 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 SIRT5Q9NXA8 310 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 FBXL4Q9UKA2 621 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 CHD6Q8TD26 2715 aa19.25■□□□□ 0.67
HMGA2-211ENST00000545998 IGKV3D-11A0A0A0MRZ8 115 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ARHGAP10A1A4S6 786 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 CLDN4O14493 209 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 KLF11O14901 512 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 RGS14O43566 566 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ACPPP15309 386 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 NR1D1P20393 614 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 HSD17B7P56937 341 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 TNFRSF17Q02223 184 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 BTKQ06187 659 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ACSM2AQ08AH3 577 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ACSM2BQ68CK6 577 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 BORAQ6PGQ7 559 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ANKRD37Q7Z713 158 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 DDIASQ8IXT1 998 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 ZNF75CPQ92670 426 aaPredicted RBP19.24■□□□□ 0.67
HMGA2-211ENST00000545998 NECTIN3Q9NQS3 549 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 PRTFDC1Q9NRG1 225 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 MCM8Q9UJA3 840 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 CLDN16Q9Y5I7 305 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 DOCK10Q96BY6 2186 aa19.24■□□□□ 0.67
HMGA2-211ENST00000545998 A0A1W2PR48 441 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 BLACEA4D250 179 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 ARGFXA6NJG6 315 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 RPL14P50914 215 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 MAPK12P53778 367 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 XKR7Q5GH72 579 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 C18orf63Q68DL7 685 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 GALNT18Q6P9A2 607 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 APLFQ8IW19 511 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TMEM102Q8N9M5 508 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 APOBEC4Q8WW27 367 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 EXTL1Q92935 676 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 METTL2AQ96IZ6 378 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 VPS50Q96JG6 964 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 MED4Q9NPJ6 270 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 INTS9Q9NV88 658 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 IGHV1-45A0A0A0MS14 117 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TCRBV16S1A1N1A0A5B0 115 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TGFBR3LH3BV60 316 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 DYNC1I1O14576 645 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 PCDH7O60245 1069 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 CTNSO60931 367 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 COX6A1P12074 109 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 TIA1P31483 386 aaKnown RBP eCLIP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 BUD31P41223 144 aaPredicted RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 OCRLQ01968 901 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 RHDQ02161 417 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 EEF1A2Q05639 463 aaKnown RBP19.23■□□□□ 0.67
HMGA2-211ENST00000545998 KIAA0040Q15053 153 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 DCAF10Q5QP82 559 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 CPZQ66K79 652 aa19.23■□□□□ 0.67
HMGA2-211ENST00000545998 CPEB2Q7Z5Q1 589 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms