RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CPEP16870 476 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FEN1P39748 380 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CDH12P55289 794 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PRPS1P60891 318 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CTBSQ01459 385 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 RIN1Q13671 783 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 RCAN2Q14206 197 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SELPLGQ14242 412 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF789Q5FWF6 425 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CYHR1Q6ZMK1 362 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 KCTD9Q7L273 389 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CNTN4Q8IWV2 1026 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FRMD1Q8N878 549 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 DAZAP1Q96EP5 407 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 TAAR1Q96RJ0 339 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 DOK1Q99704 481 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ULBP1Q9BZM6 244 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PPIL3Q9H2H8 161 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ABCB8Q9NUT2 735 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FBXL4Q9UKA2 621 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 NFASCO94856 1347 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SPATA31A5Q5VU36 1347 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SPATA31A7Q8IWB4 1347 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 TCRBV7S2A1N4TA0A589 114 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 STX7O15400 261 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 LRIG2O94898 1065 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ALPPP05187 535 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 C1SP09871 688 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ALPPL2P10696 532 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 RNH1P13489 461 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 OSMP13725 252 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ACTR2P61160 394 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 AP1S1P61966 158 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SLC18A2Q05940 514 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 GK3PQ14409 553 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 AGKQ53H12 422 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 GPR157Q5UAW9 335 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 TFAP2DQ7Z6R9 452 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 TMEM126BQ8IUX1 230 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 HDDC3Q8N4P3 179 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SEMA6DQ8NFY4 1073 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SETD6Q8TBK2 473 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SPPL2AQ8TCT8 520 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 DYNC2LI1Q8TCX1 351 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 RNASE8Q8TDE3 154 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 STK35Q8TDR2 534 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 MZB1Q8WU39 189 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 DGCR6LQ9BY27 220 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FKRPQ9H9S5 495 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SLCO1C1Q9NYB5 712 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FBXW2Q9UKT8 454 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PADI2Q9Y2J8 665 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF281Q9Y2X9 895 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 MYMKA6NI61 221 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 M0R3G1 203 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ADAM12O43184 909 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ARG1P05089 322 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 MC4RP32245 332 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CSNK1EP49674 416 aaKnown RBP8.54□□□□□ -1.04
VPS13D-212ENST00000543766 FHITP49789 147 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PRKAG1P54619 331 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CBFBQ13951 182 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 GTDC1Q4AE62 458 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 AGAP6Q5VW22 663 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 KYQ8NBH2 561 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 NETO2Q8NC67 525 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 TCTEX1D2Q8WW35 142 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 AGAP4Q96P64 663 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 CPNE5Q9HCH3 593 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 BTBD3Q9Y2F9 522 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PCDHA2Q9Y5H9 948 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
VPS13D-212ENST00000543766 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF208O43345 1280 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 ADH1BP00325 375 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 AMHP03971 560 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 UCHL3P15374 230 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 THBS4P35443 961 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 RGS6P49758 472 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 CAV1Q03135 178 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 SBK1Q52WX2 424 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 ADGRD1Q6QNK2 874 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 POMGNT2Q8NAT1 580 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 OR11L1Q8NGX0 322 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 OXNAD1Q96HP4 312 aaPredicted RBP8.53□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
VPS13D-212ENST00000543766 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 TBX5Q99593 518 aa8.53□□□□□ -1.04
VPS13D-212ENST00000543766 RANGRFQ9HD47 186 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms