RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 HBQ1P09105 142 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PTAFRP25105 342 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PTPN3P26045 913 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PREPP48147 710 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ARFIP1P53367 373 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CAMK2GQ13555 558 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CAMK2DQ13557 499 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 FGL2Q14314 439 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 AP5B1Q2VPB7 878 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HFEQ30201 348 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PAN3Q58A45 887 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 BCL2L15Q5TBC7 163 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TAS1R1Q7RTX1 841 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 DDX53Q86TM3 631 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 B3GALNT2Q8NCR0 500 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HGDQ93099 445 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PYURFQ96I23 114 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 C10orf90Q96M02 699 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM209Q96SK2 561 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 MND1Q9BWT6 205 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ARNT2Q9HBZ2 717 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HHATLQ9HCP6 504 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CRTAC1Q9NQ79 661 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ACAD8Q9UKU7 415 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PCDHGB7Q9Y5F8 929 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF638Q14966 1978 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 GLYATL1P3A0A0U1RQE8 302 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 WASH4PA8MWX3 477 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ARNTLO00327 626 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 CLDN5O00501 218 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 E2F3O00716 465 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ZBTB24O43167 697 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ADRB1P08588 477 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ADRA2AP08913 450 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 NMBP08949 121 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 FPR1P21462 350 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 DNASE1P24855 282 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ADORA2BP29275 332 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 DNAJA1P31689 397 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 MAGEA2P43356 314 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 HNRNPA0Q13151 305 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 EIF4HQ15056 248 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SF3A2Q15428 464 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF425Q6IV72 752 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PYHIN1Q6K0P9 492 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 FUT10Q6P4F1 479 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PSRC1Q6PGN9 363 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SCIMPQ6UWF3 145 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 UNC5DQ6UXZ4 953 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 KRT77Q7Z794 578 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PGBD3Q8N328 593 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PTGR2Q8N8N7 351 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 OR4F6Q8NGB9 312 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SFT2D1Q8WV19 159 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC13A3Q8WWT9 602 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 KHSRPQ92945 711 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC25A46Q96AG3 418 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 TBC1D20Q96BZ9 403 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ULK4Q96C45 1275 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 MALT1Q9UDY8 824 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PLEKHB1Q9UF11 243 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF451Q9Y4E5 1061 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 MRPL42Q9Y6G3 142 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 RNF215Q9Y6U7 377 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 AIPO00170 330 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SIGLEC5O15389 551 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 CDRT1O95170 752 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 MLYCDO95822 493 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 IFNA4P05014 189 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 RNF224P0DH78 156 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ARL4AP40617 200 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 VSX2P58304 361 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SIGLEC14Q08ET2 396 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 P2RY14Q15391 338 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF528Q3MIS6 628 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 VASNQ6EMK4 673 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PKN3Q6P5Z2 889 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 C12orf40Q86WS4 652 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 C9orf43Q8TAL5 461 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 TCEAL3Q969E4 200 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 ELP4Q96EB1 424 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PGAP3Q96FM1 320 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 KCNC2Q96PR1 638 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC38A2Q96QD8 506 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 MNTQ99583 582 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 CCM2Q9BSQ5 444 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM43Q9BTV4 400 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 CRISPLD1Q9H336 500 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 NT5DC2Q9H857 520 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 UBP1Q9NZI7 540 aa9.07□□□□□ -0.96
CTNNA1-243ENST00000540387 PCDHB8Q9UN66 801 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms