RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ATP1A4Q13733 1029 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 PDGFRLQ15198 375 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 ARMC8Q8IUR7 673 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 KLK6Q92876 244 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 EXOSC8Q96B26 276 aaKnown RBP23.71■■□□□ 1.39
RAB40C-204ENST00000538492 OSGEPL1Q9H4B0 414 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 WDR37Q9Y2I8 494 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 SNX11Q9Y5W9 270 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 OR2A25A4D2G3 310 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 POU2F2P09086 479 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 SLC35G4P0C7Q5 338 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 OCA2Q04671 838 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 IGFN1Q86VF2 1251 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 RAB8BQ92930 207 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 NECTIN3Q9NQS3 549 aa23.71■■□□□ 1.39
RAB40C-204ENST00000538492 THAP10Q9P2Z0 257 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-204ENST00000538492 SH3BP5O60239 455 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 GADD45GO95257 159 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 RECKO95980 971 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 RPN2P04844 631 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SERPIND1P05546 499 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 CD36P16671 472 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SLC19A1P41440 591 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 GPM6BQ13491 265 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SYT16Q17RD7 645 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 TMEM236Q5W0B7 351 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-204ENST00000538492 REEP3Q6NUK4 255 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 ADCK2Q7Z695 626 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 KIAA1958Q8N8K9 716 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SLC38A5Q8WUX1 472 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 UCN3Q969E3 161 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 ZNF556Q9HAH1 456 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 PELI2Q9HAT8 420 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 LHX9Q9NQ69 397 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 PRDM8Q9NQV8 689 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SERGEFQ9UGK8 458 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 A0A1W2PPV9 198 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 CAPN5O15484 640 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-204ENST00000538492 PDPK1O15530 556 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 OR1F1O43749 312 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 NADKO95544 446 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-204ENST00000538492 GJA4P35212 333 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 DGKEP52429 567 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 ARHGAP19Q14CB8 494 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 LINC01555Q8NAE3 123 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 RHOXF1Q8NHV9 184 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 PHF10Q8WUB8 498 aaKnown RBP23.7■■□□□ 1.38
RAB40C-204ENST00000538492 TEX10Q9NXF1 929 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SPATA7Q9P0W8 599 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 PSORS1C1Q9UIG5 152 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SLC6A14Q9UN76 642 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 ENPP4Q9Y6X5 453 aa23.7■■□□□ 1.38
RAB40C-204ENST00000538492 SZT2Q5T011 3432 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 FAM227AF5H4B4 570 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 KAT7O95251 611 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 ACP5P13686 325 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 CXCR2P25025 360 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 HEPACAMQ14CZ8 416 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 AGBL4Q5VU57 503 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 NLGN4XQ8N0W4 816 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 SMPDL3AQ92484 453 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 WASH6PQ9NQA3 447 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 DNAH14Q0VDD8 3507 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 COL4A3Q01955 1670 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 PRR23AA6NEV1 266 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 C5orf58C9J3I9 102 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 TMPRSS11DO60235 418 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 SEMA3DO95025 777 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 STATHP02808 62 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 TGFBR2P37173 567 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 PUM1Q14671 1186 aaKnown RBP eCLIP23.69■■□□□ 1.38
RAB40C-204ENST00000538492 FAM46CQ5VWP2 391 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 VITQ6UXI7 678 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 DCDC5Q6ZRR9 648 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 PAGE2Q7Z2X7 111 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 DNAJC22Q8N4W6 341 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 AMER3Q8N944 861 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 BCL7BQ9BQE9 202 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 XKR8Q9H6D3 395 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 GPR83Q9NYM4 423 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 ZNF226Q9NYT6 803 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 MYO10Q9HD67 2058 aa23.69■■□□□ 1.38
RAB40C-204ENST00000538492 PPM1DO15297 605 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 LCMT2O60294 686 aaKnown RBP23.68■■□□□ 1.38
RAB40C-204ENST00000538492 MRPS14O60783 128 aaKnown RBP23.68■■□□□ 1.38
RAB40C-204ENST00000538492 PAK4O96013 591 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-204ENST00000538492 IFNW1P05000 195 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 ZNF12P17014 697 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 FCARP24071 287 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 CSNK2BP67870 215 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 SPDYE7PQ495Y7 208 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 SAXO2Q658L1 398 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 GGHQ92820 318 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 NEURL3Q96EH8 262 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 CHFRQ96EP1 664 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 PDXPQ96GD0 296 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 FERD3LQ96RJ6 166 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 HCN4Q9Y3Q4 1203 aa23.68■■□□□ 1.38
RAB40C-204ENST00000538492 CLDN25C9JDP6 229 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms