RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CRATP43155 626 aa8.81□□□□□ -1
DDB1-211ENST00000538280 XCR1P46094 333 aa8.81□□□□□ -1
DDB1-211ENST00000538280 HMGA2P52926 109 aa8.81□□□□□ -1
DDB1-211ENST00000538280 RPP38P78345 283 aaKnown RBP8.81□□□□□ -1
DDB1-211ENST00000538280 CDK6Q00534 326 aa8.81□□□□□ -1
DDB1-211ENST00000538280 MEF2AQ02078 507 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 CAMK2GQ13555 558 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 NPTX1Q15818 432 aa8.81□□□□□ -1
DDB1-211ENST00000538280 CTF1Q16619 201 aa8.81□□□□□ -1
DDB1-211ENST00000538280 WSCD2Q2TBF2 565 aa8.81□□□□□ -1
DDB1-211ENST00000538280 PROX2Q3B8N5 592 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ZNF829Q3KNS6 432 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 AGBL4Q5VU57 503 aa8.81□□□□□ -1
DDB1-211ENST00000538280 FAM46CQ5VWP2 391 aa8.81□□□□□ -1
DDB1-211ENST00000538280 KHDRBS2Q5VWX1 349 aaKnown RBP8.81□□□□□ -1
DDB1-211ENST00000538280 KIAA1161Q6NSJ0 714 aa8.81□□□□□ -1
DDB1-211ENST00000538280 KLHL35Q6PF15 583 aa8.81□□□□□ -1
DDB1-211ENST00000538280 VITQ6UXI7 678 aa8.81□□□□□ -1
DDB1-211ENST00000538280 Q6ZNX1 250 aa8.81□□□□□ -1
DDB1-211ENST00000538280 PRSS48Q7RTY5 328 aa8.81□□□□□ -1
DDB1-211ENST00000538280 DGLUCYQ7Z3D6 616 aa8.81□□□□□ -1
DDB1-211ENST00000538280 AMZ2Q86W34 360 aa8.81□□□□□ -1
DDB1-211ENST00000538280 C17orf64Q86WR6 236 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ARMC8Q8IUR7 673 aa8.81□□□□□ -1
DDB1-211ENST00000538280 MMAAQ8IVH4 418 aaKnown RBP8.81□□□□□ -1
DDB1-211ENST00000538280 ENTHD1Q8IYW4 607 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ADGRF3Q8IZF5 1079 aa8.81□□□□□ -1
DDB1-211ENST00000538280 SLC44A3Q8N4M1 653 aa8.81□□□□□ -1
DDB1-211ENST00000538280 SVOPQ8N4V2 548 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ANKRD53Q8N9V6 530 aa8.81□□□□□ -1
DDB1-211ENST00000538280 NFKBIDQ8NI38 313 aa8.81□□□□□ -1
DDB1-211ENST00000538280 FNDC8Q8TC99 324 aa8.81□□□□□ -1
DDB1-211ENST00000538280 GIPC3Q8TF64 312 aa8.81□□□□□ -1
DDB1-211ENST00000538280 APOBEC4Q8WW27 367 aaKnown RBP8.81□□□□□ -1
DDB1-211ENST00000538280 OR5P2Q8WZ92 322 aa8.81□□□□□ -1
DDB1-211ENST00000538280 TFGQ92734 400 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 FGF13Q92913 245 aa8.81□□□□□ -1
DDB1-211ENST00000538280 FAM131CQ96AQ9 280 aa8.81□□□□□ -1
DDB1-211ENST00000538280 TM4SF18Q96CE8 201 aa8.81□□□□□ -1
DDB1-211ENST00000538280 NEURL3Q96EH8 262 aa8.81□□□□□ -1
DDB1-211ENST00000538280 TPD52L3Q96J77 140 aa8.81□□□□□ -1
DDB1-211ENST00000538280 AIF1LQ9BQI0 150 aa8.81□□□□□ -1
DDB1-211ENST00000538280 RPP25Q9BUL9 199 aaKnown RBP8.81□□□□□ -1
DDB1-211ENST00000538280 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
DDB1-211ENST00000538280 RSPH9Q9H1X1 276 aaPredicted RBP8.81□□□□□ -1
DDB1-211ENST00000538280 CXorf36Q9H7Y0 433 aa8.81□□□□□ -1
DDB1-211ENST00000538280 A4GALTQ9NPC4 353 aa8.81□□□□□ -1
DDB1-211ENST00000538280 SCN3BQ9NY72 215 aa8.81□□□□□ -1
DDB1-211ENST00000538280 KIF17Q9P2E2 1029 aa8.81□□□□□ -1
DDB1-211ENST00000538280 KCND3Q9UK17 655 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ADAM29Q9UKF5 820 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ACSL6Q9UKU0 697 aa8.81□□□□□ -1
DDB1-211ENST00000538280 ANGPT4Q9Y264 503 aa8.81□□□□□ -1
DDB1-211ENST00000538280 POFUT2Q9Y2G5 429 aa8.81□□□□□ -1
DDB1-211ENST00000538280 TMEM98Q9Y2Y6 226 aa8.81□□□□□ -1
DDB1-211ENST00000538280 PCDHGA6Q9Y5G7 932 aa8.81□□□□□ -1
DDB1-211ENST00000538280 PCDHGA2Q9Y5H1 932 aa8.81□□□□□ -1
DDB1-211ENST00000538280 CACNA1BQ00975 2339 aa8.8□□□□□ -1
DDB1-211ENST00000538280 ANTXRLA6NF34 631 aa8.8□□□□□ -1
DDB1-211ENST00000538280 CACNB4O00305 520 aaPredicted RBP8.8□□□□□ -1
DDB1-211ENST00000538280 SAP18O00422 153 aaKnown RBP8.8□□□□□ -1
DDB1-211ENST00000538280 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
DDB1-211ENST00000538280 FAM20BO75063 409 aa8.8□□□□□ -1
DDB1-211ENST00000538280 GBAP04062 536 aa8.8□□□□□ -1
DDB1-211ENST00000538280 CYP4B1P13584 511 aa8.8□□□□□ -1
DDB1-211ENST00000538280 ZNF182P17025 639 aaPredicted RBP8.8□□□□□ -1
DDB1-211ENST00000538280 ITGA2P17301 1181 aa8.8□□□□□ -1
DDB1-211ENST00000538280 GABRB1P18505 474 aa8.8□□□□□ -1
DDB1-211ENST00000538280 CBLP22681 906 aa8.8□□□□□ -1
DDB1-211ENST00000538280 GJA4P35212 333 aa8.8□□□□□ -1
DDB1-211ENST00000538280 KRT20P35900 424 aa8.8□□□□□ -1
DDB1-211ENST00000538280 TRIM23P36406 574 aa8.8□□□□□ -1
DDB1-211ENST00000538280 GALK1P51570 392 aa8.8□□□□□ -1
DDB1-211ENST00000538280 MLLT10P55197 1068 aa8.8□□□□□ -1
DDB1-211ENST00000538280 RAB15P59190 212 aa8.8□□□□□ -1
DDB1-211ENST00000538280 DSTNP60981 165 aa8.8□□□□□ -1
DDB1-211ENST00000538280 TRA2BP62995 288 aaKnown RBP8.8□□□□□ -1
DDB1-211ENST00000538280 BNIP3Q12983 259 aa8.8□□□□□ -1
DDB1-211ENST00000538280 RUNX3Q13761 415 aa8.8□□□□□ -1
DDB1-211ENST00000538280 SPCS2Q15005 226 aa8.8□□□□□ -1
DDB1-211ENST00000538280 MLC1Q15049 377 aa8.8□□□□□ -1
DDB1-211ENST00000538280 SLC5A12Q1EHB4 618 aa8.8□□□□□ -1
DDB1-211ENST00000538280 MICAQ29983 383 aa8.8□□□□□ -1
DDB1-211ENST00000538280 C2orf27AQ580R0 203 aa8.8□□□□□ -1
DDB1-211ENST00000538280 UBE2UQ5VVX9 321 aa8.8□□□□□ -1
DDB1-211ENST00000538280 EGFLAMQ63HQ2 1017 aa8.8□□□□□ -1
DDB1-211ENST00000538280 GET4Q7L5D6 327 aaPredicted RBP8.8□□□□□ -1
DDB1-211ENST00000538280 RNF130Q86XS8 419 aa8.8□□□□□ -1
DDB1-211ENST00000538280 PARP8Q8N3A8 854 aa8.8□□□□□ -1
DDB1-211ENST00000538280 ATG16L2Q8NAA4 619 aa8.8□□□□□ -1
DDB1-211ENST00000538280 TP53I13Q8NBR0 393 aaPredicted RBP8.8□□□□□ -1
DDB1-211ENST00000538280 OR10G2Q8NGC3 310 aa8.8□□□□□ -1
DDB1-211ENST00000538280 B4GALNT2Q8NHY0 566 aa8.8□□□□□ -1
DDB1-211ENST00000538280 PSMA8Q8TAA3 256 aa8.8□□□□□ -1
DDB1-211ENST00000538280 TRUB1Q8WWH5 349 aaKnown RBP8.8□□□□□ -1
DDB1-211ENST00000538280 GEMIN6Q8WXD5 167 aaKnown RBP8.8□□□□□ -1
DDB1-211ENST00000538280 SMPDL3AQ92484 453 aa8.8□□□□□ -1
DDB1-211ENST00000538280 PDXPQ96GD0 296 aa8.8□□□□□ -1
DDB1-211ENST00000538280 CNTNAP3BQ96NU0 1288 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms