RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 OR11G2Q8NGC1 345 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 MGARPQ8TDB4 240 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 MESP1Q9BRJ9 268 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 DDX31Q9H8H2 851 aaKnown RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 LYARQ9NX58 379 aaKnown RBP12.74□□□□□ -0.37
RPAIN-205ENST00000536255 PHF11Q9UIL8 331 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 ANAPC2Q9UJX6 822 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 PCDHGB7Q9Y5F8 929 aa12.74□□□□□ -0.37
RPAIN-205ENST00000536255 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 PRMT3O60678 531 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 B4GALT2O60909 372 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 JRKO75564 520 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SASH3O75995 380 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 HSPA4LO95757 839 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 CHRNGP07510 517 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 BSGP35613 385 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-205ENST00000536255 FOXA1P55317 472 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SOX8P57073 446 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 STX3Q13277 289 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 RAPSNQ13702 412 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 MYBPC3Q14896 1274 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 ABRAXAS2Q15018 415 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SPIN4Q56A73 249 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 CLEC6AQ6EIG7 209 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 QSOX2Q6ZRP7 698 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 RNF165Q6ZSG1 346 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 ZNF595Q8IYB9 648 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 METTL4Q8N3J2 472 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 PLPP5Q8NEB5 264 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 C8orf44Q96CB5 159 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 HBEGFQ99075 208 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 SMAD5Q99717 465 aaKnown RBP12.73□□□□□ -0.37
RPAIN-205ENST00000536255 MRPL1Q9BYD6 325 aaKnown RBP12.73□□□□□ -0.37
RPAIN-205ENST00000536255 RBCK1Q9BYM8 510 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 LANCL2Q9NS86 450 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 FIS1Q9Y3D6 152 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 ZNF451Q9Y4E5 1061 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 TRAF6Q9Y4K3 522 aa12.73□□□□□ -0.37
RPAIN-205ENST00000536255 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 A0A0A6YYD5 115 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 A0A1W2PQ72 361 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 SLC28A1O00337 649 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 KLHL41O60662 606 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 DNAJB6O75190 326 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 GUCY1B2O75343 617 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 RSL1D1O76021 490 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 HPP00738 406 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ALPPP05187 535 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 BGNP21810 368 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 CPN2P22792 545 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ITGA3P26006 1051 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 CASRP41180 1078 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 SLC1A6P48664 564 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 HTR6P50406 440 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 EFNA3P52797 238 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 HSD17B7P56937 341 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ABCE1P61221 599 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 RHAGQ02094 409 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 NSDHLQ15738 373 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 CCNYL2Q5T2Q4 361 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 FAAH2Q6GMR7 532 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 COMMD6Q7Z4G1 85 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 TRIM46Q7Z4K8 759 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 GPR180Q86V85 440 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 SHISA5Q8N114 240 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 FAM47BQ8NA70 645 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 TEX19Q8NA77 164 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 PTCHD1Q96NR3 888 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 CCT7Q99832 543 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ZNF717Q9BY31 904 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ACPTQ9BZG2 426 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 ILKAPQ9H0C8 392 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-205ENST00000536255 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 PRDM9Q9NQV7 894 aa12.72□□□□□ -0.37
RPAIN-205ENST00000536255 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms