RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 RPS5P46782 204 aaKnown RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 MNX1P50219 401 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CCNJQ5T5M9 372 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CPTPQ5TA50 214 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 KDM4DQ6B0I6 523 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 SETD6Q8TBK2 473 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 KCNE2Q9Y6J6 123 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 PLXNA2O75051 1894 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 OR2AG2A6NM03 316 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 ATP6V1G2-DDX39BF2Z307 99 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 EIF2B5Q13144 721 aaKnown RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SYNPOQ8N3V7 929 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 KBTBD8Q8NFY9 601 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 OR4M2Q8NGB6 313 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 CHTF18Q8WVB6 975 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SH3KBP1Q96B97 665 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 E7EQ34 232 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SLC9A3R1O14745 358 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 TIMP1P01033 207 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 POU3F3P20264 500 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 PRIM2P49643 509 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 TEAD2Q15562 447 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 LY6G5CQ5SRR4 150 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 CAPN13Q6MZZ7 669 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF767PQ75MW2 155 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 CYP4Z1Q86W10 505 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 COQ8BQ96D53 544 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 MRGPRX3Q96LB0 322 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 CEP19Q96LK0 163 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 MTERF1Q99551 399 aaKnown RBP17.17■□□□□ 0.34
RAB40C-203ENST00000535977 KCNS3Q9BQ31 491 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SLC30A2Q9BRI3 323 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 OR51E2Q9H255 320 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 TPT1P8Q9HAU6 139 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 SIRT5Q9NXA8 310 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 GLTPQ9NZD2 209 aa17.17■□□□□ 0.34
RAB40C-203ENST00000535977 TSPAN6O43657 245 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 CPSF4O95639 269 aaKnown RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 ICAM2P13598 275 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 MAPK12P53778 367 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 BNC1Q01954 994 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 TMEM115Q12893 351 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 SLC14A1Q13336 389 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 GTF2H3Q13889 308 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 BTBD16Q32M84 506 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 PTOV1Q86YD1 416 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 PLCZ1Q86YW0 608 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 RASGEF1AQ8N9B8 481 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 UBE2FQ969M7 185 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 MARVELD3Q96A59 401 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 MED8Q96G25 268 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 CRISPLD2Q9H0B8 497 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■■■■□ 21.9
RAB40C-203ENST00000535977 ZNF556Q9HAH1 456 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 RASSF1Q9NS23 344 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 EIF3KQ9UBQ5 218 aaKnown RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 GMPPBQ9Y5P6 360 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 PDGFAP04085 211 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 RPLP0P05388 317 aaKnown RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 ANXA4P09525 319 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 PIK3CBP42338 1070 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 TEAD4Q15561 434 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF77Q15935 545 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 TIGD6Q17RP2 521 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 SIGLEC11Q96RL6 698 aa17.16■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF282Q9UDV7 671 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-203ENST00000535977 MGAT4DA6NG13 374 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 B3GALT4O96024 378 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 LAMP1P11279 417 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 SYN1P17600 705 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 CSNK2BP67870 215 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 STK11Q15831 433 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TMEM215Q68D42 235 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 MED27Q6P2C8 311 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TSPYL5Q86VY4 417 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TRIM48Q8IWZ4 208 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 YIPF7Q8N8F6 280 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 UBASH3BQ8TF42 649 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TMEM80Q96HE8 168 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 PKP4Q99569 1192 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 BARD1Q99728 777 aaKnown RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 LINC00597Q9H2U6 94 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 REEP1Q9H902 201 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 MUTYHQ9UIF7 546 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 ABCG2Q9UNQ0 655 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TRAPPC4Q9Y296 219 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 GABRR3A8MPY1 467 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 MYO1GB0I1T2 1018 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 AGRPO00253 132 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 ELFN1P0C7U0 828 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 CSF2RAP15509 400 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 RPL3P39023 403 aaKnown RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 DAPP51397 102 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 ITGA1P56199 1179 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 DDX39BQ13838 428 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms