RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 FAM83DQ9H4H8 585 aa13.27□□□□□ -0.29
LPCAT3-203ENST00000535479 SMURF1Q9HCE7 757 aa13.27□□□□□ -0.29
LPCAT3-203ENST00000535479 CCNB1IP1Q9NPC3 277 aa13.27□□□□□ -0.29
LPCAT3-203ENST00000535479 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
LPCAT3-203ENST00000535479 H7C4K7 107 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 SEMA3DO95025 777 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TARDBPQ13148 414 aaKnown RBP eCLIP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 VEPH1Q14D04 833 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TBCEQ15813 527 aaPredicted RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF79Q15937 498 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TYW3Q6IPR3 259 aaKnown RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 PNCKQ6P2M8 343 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ATCAYQ86WG3 371 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 HORMAD2Q8N7B1 307 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 UBTD2Q8WUN7 234 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 PPCDCQ96CD2 204 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 COL21A1Q96P44 957 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 PITX2Q99697 317 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 RACGAP1Q9H0H5 632 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 OR2AG1Q9H205 316 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 CXorf36Q9H7Y0 433 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TRPV5Q9NQA5 729 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TM7SF3Q9NS93 570 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 NTNG1Q9Y2I2 539 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 SDK1Q7Z5N4 2213 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 AKR7A2O43488 359 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 APOA1P02647 267 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 C8orf89P0DMQ9 161 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 DGLUCYQ7Z3D6 616 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 GALNT13Q8IUC8 556 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 NPAS4Q8IUM7 802 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF480Q8WV37 535 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 IPCEF1Q8WWN9 437 aaPredicted RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 JPH3Q8WXH2 748 aaPredicted RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ING5Q8WYH8 240 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ITPKCQ96DU7 683 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 DEPDC7Q96QD5 511 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 CHST8Q9H2A9 424 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 RUVBL1Q9Y265 456 aaKnown RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 CCR2P41597 374 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 CXCR4P61073 352 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 NTHL1P78549 312 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 BCL2A1Q16548 175 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 FLYWCH1Q4VC44 716 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 TMEM215Q68D42 235 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF517Q6ZMY9 492 aaPredicted RBP13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 LHFPL3Q86UP9 236 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 LRRTM4Q86VH4 590 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 SHISA5Q8N114 240 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 OR6F1Q8NGZ6 308 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 XAGE5Q8WWM1 108 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 F2RL3Q96RI0 385 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 GPA33Q99795 319 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 RDH14Q9HBH5 336 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 MIEF1Q9NQG6 463 aa13.26□□□□□ -0.29
LPCAT3-203ENST00000535479 WASH3PC4AMC7 463 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 KPNA3O00505 521 aaPredicted RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 GABRB1P18505 474 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 CXCR2P25025 360 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 APEX1P27695 318 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 RAB15P59190 212 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 CSTF3Q12996 717 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SYPL1Q16563 259 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 AGAP6Q5VW22 663 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 MTFR2Q6P444 385 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 IL20RBQ6UXL0 311 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 GALNT12Q8IXK2 581 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 VPS37AQ8NEZ2 397 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 KBTBD8Q8NFY9 601 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC6A18Q96N87 628 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 AGAP4Q96P64 663 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 EGLN3Q9H6Z9 239 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 CWH43Q9H720 699 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 TRPC4Q9UBN4 977 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 KIAA0100Q14667 2235 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 PRKYO43930 277 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 TMCC2O75069 709 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 GSTM1P09488 218 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 CD9P21926 228 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SOX6P35712 828 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 HTR3AP46098 478 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 FADDQ13158 208 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 PYDC2Q56P42 97 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC8B1Q6J4K2 584 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 PCSK9Q8NBP7 692 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 OR8J2Q8NGG1 315 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 OR4C15Q8NGM1 316 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 C1GALT1C1Q96EU7 318 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 DIRAS2Q96HU8 199 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 TBX5Q99593 518 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms