RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PSME2Q9UL46 239 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 RAB23Q9ULC3 237 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 ACSL5Q9ULC5 683 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 PCDHGB4Q9UN71 923 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 MRPS7Q9Y2R9 242 aaKnown RBP4.06□□□□□ -1.76
ITGB1-219ENST00000534049 ACOT9Q9Y305 439 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 UGT2A1Q9Y4X1 527 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 CYP46A1Q9Y6A2 500 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 PIAS3Q9Y6X2 628 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 SLX4Q8IY92 1834 aa4.06□□□□□ -1.76
ITGB1-219ENST00000534049 CACNA1SQ13698 1873 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 A0A087WXM4 84 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 LINC00862A6NCI5 91 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 FAM90A20PA6NIJ5 464 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SAGE2PA6NJ88 616 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 F5H423 210 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 LOC110117498-PIK3R3F6TDL0 507 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 K7ERQ8 282 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ABCD4O14678 606 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TM9SF1O15321 606 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 GYG2O15488 501 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 RGS16O15492 202 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TXNL1O43396 289 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 LDB2O43679 373 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CALUO43852 315 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 HS6ST1O60243 411 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 HBP1O60381 514 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 MED24O75448 989 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 RHOBTB1O94844 696 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SEMA3DO95025 777 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 GCNT3O95395 438 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 LDOC1O95751 146 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 STARD3NLO95772 234 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 FTCDO95954 541 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ATP1A1P05023 1023 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 POLBP06746 335 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 YES1P07947 543 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CYP21A2P08686 494 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SMIM6P0DI80 62 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 FDPSP14324 419 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DARSP14868 501 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DAOP14920 347 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CYP11B1P15538 503 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CKMT2P17540 419 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 PDHA2P29803 388 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 GDI1P31150 447 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 MAT2AP31153 395 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CTNNB1P35222 781 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 GJC1P36383 396 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SLC1A4P43007 532 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SLCO1A2P46721 670 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 RFX5P48382 616 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 MEOX2P50222 304 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SLC7A2P52569 658 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ARFIP1P53367 373 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SLC18A1P54219 525 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CDH4P55283 916 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TMPRSS3P57727 454 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ACTR3P61158 418 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 COPZ1P61923 177 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 IL9RQ01113 521 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 IL1RL1Q01638 556 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DLG1Q12959 904 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CHAF1BQ13112 559 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 STX5Q13190 355 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DMP1Q13316 513 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ITGADQ13349 1161 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ZMYND11Q15326 602 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CA9Q16790 459 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 EIF2S3LQ2VIR3 472 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ACSBG2Q5FVE4 666 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 KRT79Q5XKE5 535 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CASC4Q6P4E1 433 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ARHGAP11AQ6P4F7 1023 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CYP20A1Q6UW02 462 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 LDHAL6AQ6ZMR3 332 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ZNF852Q6ZMS4 543 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 FAM47EQ6ZV65 393 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 RNF144BQ7Z419 303 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DHDDSQ86SQ9 333 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TAC4Q86UU9 113 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 HIPK1Q86Z02 1210 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 ARMC8Q8IUR7 673 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SYCE1Q8N0S2 351 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CLIP4Q8N3C7 705 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 PCDH20Q8N6Y1 951 aaKnown RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 SLC37A3Q8NCC5 494 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 NAXEQ8NCW5 288 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TRPV3Q8NET8 790 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 DNAJA4Q8WW22 397 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 THAP4Q8WY91 577 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 USP13Q92995 863 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TCEAL3Q969E4 200 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.05□□□□□ -1.762e-6■■■■■ 27.5
ITGB1-219ENST00000534049 MARC2Q969Z3 335 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 CPNE4Q96A23 557 aaPredicted RBP4.05□□□□□ -1.76
ITGB1-219ENST00000534049 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
ITGB1-219ENST00000534049 NSMCE2Q96MF7 247 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms