RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	CSTF2	P33240	577 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	SOX18	P35713	384 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	OR1E2	P47887	323 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TGM4	P49221	684 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TMED10	P49755	219 aa	Known RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	NKX2-5	P52952	324 aa	Predicted RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	NUDT6	P53370	316 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CRISP1	P54107	249 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	SMAD3	P84022	425 aa	Known RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	MC1R	Q01726	317 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF763	Q0D2J5	394 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF155	Q12901	538 aa	Predicted RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	PLD1	Q13393	1074 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TNK1	Q13470	666 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	GTF2H3	Q13889	308 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	SCARB2	Q14108	478 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	DSG2	Q14126	1118 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	LAMTOR1	Q6IAA8	161 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	KIAA1211L	Q6NV74	962 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TMC5	Q6UXY8	1006 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CCDC81	Q6ZN84	652 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	IKBIP	Q70UQ0	350 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	DPPA4	Q7L190	304 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	UBE3D	Q7Z6J8	389 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	HORMAD1	Q86X24	394 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CLIP4	Q8N3C7	705 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	PLA2G15	Q8NCC3	412 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	OR4M1	Q8NGD0	313 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	GEMIN6	Q8WXD5	167 aa	Known RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TM9SF4	Q92544	642 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	PIK3R3	Q92569	461 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	SENP5	Q96HI0	755 aa	Predicted RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	MRPL9	Q9BYD2	267 aa	Known RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CCDC90B	Q9GZT6	254 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	RUBCNL	Q9H714	662 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CXorf36	Q9H7Y0	433 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	NEK6	Q9HC98	313 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	FGF20	Q9NP95	211 aa	Predicted RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	EHD3	Q9NZN3	535 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	TRPM5	Q9NZQ8	1165 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	CRLS1	Q9UJA2	301 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	MAPRE3	Q9UPY8	281 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	INSL5	Q9Y5Q6	135 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	SNRNP200	O75643	2136 aa	Known RBP	4.21	□□□□□ -1.74
CTSC-208	ENST00000533897	HEATR5B	Q9P2D3	2071 aa		4.21	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A0X1KG70	313 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	FAM172BP	A6NC97	362 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	EFCAB10	A6NFE3	127 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	EVPLL	A8MZ36	301 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	HMGN4	O00479	90 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ADA	P00813	363 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OR56A5	P0C7T3	313 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OR12D1	P0DN82	309 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	TIMP2	P16035	220 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	FGF9	P31371	208 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CNR2	P34972	360 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	BSG	P35613	385 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MMP12	P39900	470 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ARFIP1	P53367	373 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OLR1	P78380	273 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	GALK2	Q01415	458 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	C19orf57	Q0VDD7	668 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MLLT11	Q13015	90 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CEBPE	Q15744	281 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF630	Q2M218	657 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ENTPD8	Q5MY95	495 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC35F1	Q5T1Q4	408 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CPTP	Q5TA50	214 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	GDPD4	Q6W3E5	623 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DPY19L3	Q6ZPD9	716 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	LAX1	Q8IWV1	398 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OXR1	Q8N573	874 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CLDN22	Q8N7P3	220 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SIMC1	Q8NDZ2	872 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DUSP18	Q8NEJ0	188 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	VN1R2	Q8NFZ6	395 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OR4K1	Q8NGD4	311 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	NFKBID	Q8NI38	313 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR151	Q8TDV0	419 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	HTRA1	Q92743	480 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DCLRE1C	Q96SD1	692 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	INSM2	Q96T92	566 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MTERF1	Q99551	399 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	BBS2	Q9BXC9	721 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	ADPRHL2	Q9NX46	363 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DKK3	Q9UBP4	350 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	DIMT1	Q9UNQ2	313 aa	Known RBP	4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	CFL2	Q9Y281	166 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	PCDHB7	Q9Y5E2	793 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A1W2PPV9	198 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	SNPH	O15079	494 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	KPNA5	O15131	536 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	MPZL2	O60487	215 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	C6orf47	O95873	294 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	IGSF6	O95976	241 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	IRF1	P10914	325 aa		4.2	□□□□□ -1.74
CTSC-208	ENST00000533897	OSM	P13725	252 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms