RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 RUNX3Q13761 415 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 MLF2Q15773 248 aaPredicted RBP14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 UBE3DQ7Z6J8 389 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 P2RY8Q86VZ1 359 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 ARMC8Q8IUR7 673 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 P3H2Q8IVL5 708 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 SLC38A5Q8WUX1 472 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 TRUB1Q8WWH5 349 aaKnown RBP14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 GEMIN6Q8WXD5 167 aaKnown RBP14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 KLK6Q92876 244 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 PDXPQ96GD0 296 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 SH3YL1Q96HL8 342 aaPredicted RBP14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 PIP5K1AQ99755 562 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 PELI2Q9HAT8 420 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 CCNB1IP1Q9NPC3 277 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 TEX10Q9NXF1 929 aaPredicted RBP14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 AHSPQ9NZD4 102 aa14.6□□□□□ -0.07
CACNA1E-208ENST00000533229 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 IGKV1-8A0A0C4DH67 115 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 A0A0G2JN53 185 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 WASHC1A8K0Z3 465 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 FFAR1O14842 300 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SEMA3DO95025 777 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ANXA8P13928 327 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 TGFBR2P37173 567 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 CCR8P51685 355 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 HMGA2P52926 109 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 PCBP4P57723 403 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 HSPB3Q12988 150 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 MAPK11Q15759 364 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SAXO2Q658L1 398 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 C16orf87Q6PH81 154 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 WASH2PQ6VEQ5 465 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SLC44A2Q8IWA5 706 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 FAM20CQ8IXL6 584 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 APOBEC4Q8WW27 367 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 IPCEF1Q8WWN9 437 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 RAB8BQ92930 207 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 NEURL3Q96EH8 262 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 INSM2Q96T92 566 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 COPS4Q9BT78 406 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 TEX101Q9BY14 249 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 XKR8Q9H6D3 395 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SIRT3Q9NTG7 399 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ZNF226Q9NYT6 803 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 PSORS1C1Q9UIG5 152 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ANGPT4Q9Y264 503 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 PMF1-BGLAPU3KQ54 211 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 CAPN5O15484 640 aaPredicted RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 OR1F1O43749 312 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SEMA7AO75326 666 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 BCHEP06276 602 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ACP5P13686 325 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ITGA2P17301 1181 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 GABRB1P18505 474 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ST13P50502 369 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 NUDT6P53370 316 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 LIM2P55344 173 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 REEP5Q00765 189 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 CST6Q15828 149 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 FAM46CQ5VWP2 391 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 REEP3Q6NUK4 255 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SLCO6A1Q86UG4 719 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 NLGN4XQ8N0W4 816 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SVOPQ8N4V2 548 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 SMPDL3AQ92484 453 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 GGHQ92820 318 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 GTPBP3Q969Y2 492 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 EXOSC8Q96B26 276 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 AICDAQ9GZX7 198 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 PRDM8Q9NQV8 689 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 FAIMQ9NVQ4 179 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ZFR2Q9UPR6 939 aaKnown RBP14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 POFUT2Q9Y2G5 429 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 STON1Q9Y6Q2 735 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 ENPP4Q9Y6X5 453 aa14.59□□□□□ -0.07
CACNA1E-208ENST00000533229 COL4A3Q01955 1670 aa14.58□□□□□ -0.07
CACNA1E-208ENST00000533229 A0A1W2PP55 124 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 FAM227AF5H4B4 570 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 KMOO15229 486 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 SLC22A1O15245 554 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 PDPK1O15530 556 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 MRPS14O60783 128 aaKnown RBP14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 GADD45GO95257 159 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 GASTP01350 101 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 HNRNPCP07910 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 SLC35G4P0C7Q5 338 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 CSNK1G2P78368 415 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 NR1D2Q14995 579 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 HEPACAMQ14CZ8 416 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 UBE2Q1Q7Z7E8 422 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 ZNF554Q86TJ5 538 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 IGFN1Q86VF2 1251 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 UTP15Q8TED0 518 aaKnown RBP14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 OR5P2Q8WZ92 322 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 WFDC6Q9BQY6 131 aa14.58□□□□□ -0.08
CACNA1E-208ENST00000533229 TRPV4Q9HBA0 871 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms