RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MAGEA1P43355 309 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 PPIAP62937 165 aaKnown RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 RELQ04864 619 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 MFGE8Q08431 387 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 TUBA3CQ13748 450 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 DHX34Q14147 1143 aaKnown RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 RFTN1Q14699 578 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 OPCMLQ14982 345 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 HEPACAMQ14CZ8 416 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 HKDC1Q2TB90 917 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ZNF528Q3MIS6 628 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ASPRV1Q53RT3 343 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 NDUFAF5Q5TEU4 345 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 PRAMEF5Q5TYX0 476 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 C1orf189Q5VU69 101 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 FAM69BQ5VUD6 431 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 OTUD1Q5VV17 481 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 PRAMEF6Q5VXH4 476 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 TUBA3EQ6PEY2 450 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 CLEC2AQ6UVW9 174 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 WASH2PQ6VEQ5 465 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SYT10Q6XYQ8 523 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 C16orf62Q7Z3J2 963 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ERASQ7Z444 233 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ECHDC2Q86YB7 292 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ARFGAP2Q8N6H7 521 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SMYD1Q8NB12 490 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SPATA4Q8NEY3 305 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 OR4C5Q8NGB2 326 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 OR5AU1Q8NGC0 362 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SLC38A5Q8WUX1 472 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 TCP11Q8WWU5 503 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 IGFBPL1Q8WX77 278 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 STARD8Q92502 1023 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 EXTL1Q92935 676 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 LRR1Q96L50 414 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 CDCA3Q99618 268 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 NEURL2Q9BR09 285 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 NUP58Q9BVL2 599 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 FUNDC2Q9BWH2 189 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 POLDIP3Q9BY77 421 aaKnown RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 SLC26A1Q9H2B4 701 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 LPAR2Q9HBW0 351 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 NEK6Q9HC98 313 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 RAVER2Q9HCJ3 691 aaKnown RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 KRCC1Q9NPI7 259 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 MSRB1Q9NZV6 116 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ZDHHC2Q9UIJ5 367 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 CA5BQ9Y2D0 317 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 PARD3Q8TEW0 1356 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 WDR17Q8IZU2 1322 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PTPRUQ92729 1446 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PPIAL4CA0A0B4J2A2 164 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 A0A0G2JNG1 304 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 HEATR9A2RTY3 570 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SERINC4A6NH21 518 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 MATN3O15232 486 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 JAK2O60674 1132 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SERPINI2O75830 405 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 MBD3O95983 291 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 TFAP2AP05549 437 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 ZCCHC18P0CG32 403 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PPIAL4GP0DN37 164 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PNMTP11086 282 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 HNF1AP20823 631 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 DLSTP36957 453 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SYKP43405 635 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 NKX2-1P43699 371 aaPredicted RBP3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 ENTPD1P49961 510 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 GPR50Q13585 617 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 CEACAM7Q14002 265 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 BTG3Q14201 252 aaPredicted RBP3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 KIR2DS5Q14953 304 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 OR1C1Q15619 314 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 ITPRIPL2Q3MIP1 535 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 ZNF542PQ5EBM4 170 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SLC35D3Q5M8T2 416 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SPDYCQ5MJ68 293 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PLPP4Q5VZY2 271 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SLC27A4Q6P1M0 643 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 CEACAM20Q6UY09 585 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 TRMT11Q7Z4G4 463 aaKnown RBP3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 LONP2Q86WA8 852 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 ADHFE1Q8IWW8 467 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 CCDC36Q8IYA8 594 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 CEP112Q8N8E3 955 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 CNBD1Q8NA66 436 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 MLKLQ8NB16 471 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 DDHD1Q8NEL9 900 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 OR4L1Q8NH43 312 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 MPLKIPQ8TAP9 179 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 PHLDA1Q8WV24 401 aaPredicted RBP3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 TMEM37Q8WXS4 190 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SLC25A36Q96CQ1 311 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 SENP5Q96HI0 755 aaPredicted RBP3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 HPDLQ96IR7 371 aa3.95□□□□□ -1.78
AC055878.1-201ENST00000531858 RBM41Q96IZ5 413 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms