RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	SAMD11	Q96NU1	681 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	GTPBP2	Q9BX10	602 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	REEP4	Q9H6H4	257 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	SGK2	Q9HBY8	427 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	PRM3	Q9NNZ6	103 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	C1GALT1	Q9NS00	363 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	GKN1	Q9NS71	199 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	DNAJC27	Q9NZQ0	273 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	RNF181	Q9P0P0	153 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	MGAT4B	Q9UQ53	548 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	SNX11	Q9Y5W9	270 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	PRAMEF33	A0A0G2JMD5	474 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRBC2	A0A5B9	178 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141		E7EQ34	232 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PRAMEF10	O60809	474 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CSF2	P04141	144 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CCNYL3	P0C7X3	344 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ARAF	P10398	606 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CPE	P16870	476 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ALAS2	P22557	587 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	HOXD11	P31277	338 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	SDC2	P34741	201 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPC1	P35052	558 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CHI3L1	P36222	383 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PNLIPRP1	P54315	467 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	RAB25	P57735	213 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF763	Q0D2J5	394 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TARDBP	Q13148	414 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	LIPK	Q5VXJ0	399 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	C12orf73	Q69YU5	71 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	DPY19L3	Q6ZPD9	716 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TPRG1	Q6ZUI0	275 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	METTL3	Q86U44	580 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	NELL2	Q99435	816 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PTPN18	Q99952	460 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPR62	Q9BZJ7	368 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PLEKHB1	Q9UF11	243 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	STOML2	Q9UJZ1	356 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CCDC88C	Q9P219	2028 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	NPIPB15	A6NHN6	443 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141		K7ERQ8	282 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PLA2G10	O15496	165 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	LATS1	O95835	1130 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	IGSF6	O95976	241 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	SLC10A3	P09131	477 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	C1S	P09871	688 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PRKAR1A	P10644	381 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CSK	P41240	450 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	GSTM5	P46439	218 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PPP3R1	P63098	170 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	HEPACAM	Q14CZ8	416 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	SF1	Q15637	639 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	OCLN	Q16625	522 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF852	Q6ZMS4	543 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	USP45	Q70EL2	814 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TSPAN33	Q86UF1	283 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	VRK3	Q8IV63	474 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	DUSP18	Q8NEJ0	188 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	DEDD2	Q8WXF8	326 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	SOCS4	Q8WXH5	440 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CITED4	Q96RK1	184 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TSSK6	Q9BXA6	273 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	RC3H2	Q9HBD1	1191 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	RBFOX1	Q9NWB1	397 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRPM5	Q9NZQ8	1165 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	RAB23	Q9ULC3	237 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	DIMT1	Q9UNQ2	313 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141		A0A0G2JMP0	313 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	STK25	O00506	426 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	C6orf47	O95873	294 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	GSTM1	P09488	218 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	SRC	P12931	536 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ATP1B2	P14415	290 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PTBP1	P26599	531 aa	Known RBP eCLIP	9.8	□□□□□ -0.84	4e-17	■■■■■ 34
SPIDR-225	ENST00000524141	IFNA8	P32881	189 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TGM4	P49221	684 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	ELAVL2	Q12926	359 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CYP27C1	Q4G0S4	372 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	WDR45B	Q5MNZ6	344 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	METAP1D	Q6UB28	335 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	CRTC1	Q6UUV9	634 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	RSPO2	Q6UXX9	243 aa	Predicted RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	USP30	Q70CQ3	517 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	FAM217A	Q8IXS0	508 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRPV1	Q8NER1	839 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	OR4K1	Q8NGD4	311 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	OR5H6	Q8NGV6	325 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	TEFM	Q96QE5	360 aa	Known RBP	9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	DHRS9	Q9BPW9	319 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	BRD9	Q9H8M2	597 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	REV1	Q9UBZ9	1251 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PHF11	Q9UIL8	331 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141	PCDHGB7	Q9Y5F8	929 aa		9.8	□□□□□ -0.84
SPIDR-225	ENST00000524141		A8MX80	341 aa		9.79	□□□□□ -0.84
SPIDR-225	ENST00000524141		H3BN98	237 aa		9.79	□□□□□ -0.84
SPIDR-225	ENST00000524141	FAAH	O00519	579 aa		9.79	□□□□□ -0.84
SPIDR-225	ENST00000524141	PLD2	O14939	933 aa		9.79	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPR37L1	O60883	481 aa		9.79	□□□□□ -0.84
SPIDR-225	ENST00000524141	NOS1AP	O75052	506 aa	Predicted RBP	9.79	□□□□□ -0.84

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