RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 CDKL1Q00532 357 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 SP3Q02447 781 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 LRRC74AQ0VAA2 488 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 SRSF9Q13242 221 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 EXOSC7Q15024 291 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 OR1C1Q15619 314 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 EXT1Q16394 746 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ZNF74Q16587 644 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 DUSP5Q16690 384 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CEP55Q53EZ4 464 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 AGKQ53H12 422 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ATP1A1-AS1Q5TC04 95 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 C1orf189Q5VU69 101 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 C9orf57Q5W0N0 161 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ARHGAP17Q68EM7 881 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 NADSYN1Q6IA69 706 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CAPRIN2Q6IMN6 1127 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CDC42EP5Q6NZY7 148 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 LRRC8BQ6P9F7 803 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 FOXL2NBQ6ZUU3 175 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 C5orf24Q7Z6I8 188 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 VPS36Q86VN1 386 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 BANPQ8N9N5 519 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 POC1AQ8NBT0 407 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 OR1L3Q8NH93 324 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CHPT1Q8WUD6 406 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 SHC3Q92529 594 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CASP10Q92851 521 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 CD101Q93033 1021 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 TMEM45BQ96B21 275 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 THOC3Q96J01 351 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 LURAP1Q96LR2 239 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ZNF778Q96MU6 729 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 NKX3-1Q99801 234 aaPredicted RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ERP44Q9BS26 406 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 EGLN1Q9GZT9 426 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 THAP2Q9H0W7 228 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 DDX31Q9H8H2 851 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 COG4Q9H9E3 785 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 YAE1D1Q9NRH1 226 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 COX16Q9P0S2 106 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 TAAR2Q9P1P5 351 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 MRPS7Q9Y2R9 242 aaKnown RBP3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 OR1A2Q9Y585 309 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 ABCC4O15439 1325 aa3.35□□□□□ -1.87
RNU6-27P-201ENST00000516146 A0A087WZ39 114 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TRIM49BA6NDI0 452 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 MLNRO43193 412 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 KRT86O43790 486 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 ECE2O60344 883 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 CSO75390 466 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 PALMO75781 387 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 RHOBTB1O94844 696 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TXNDC12O95881 172 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 GP9P14770 177 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 PAICSP22234 425 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 HNRNPA2B1P22626 353 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 ACTR1AP61163 376 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 MFGE8Q08431 387 aaPredicted RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 KRT81Q14533 505 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 P2RY6Q15077 328 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 CCDC6Q16204 474 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 IZUMO4Q1ZYL8 232 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 SLC36A3Q495N2 470 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 ARHGEF16Q5VV41 709 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 WBP2NLQ6ICG8 309 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 CAPN13Q6MZZ7 669 aaPredicted RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TRMT1LQ7Z2T5 733 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 FADS6Q8N9I5 356 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 MLKLQ8NB16 471 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 OR4D10Q8NGI6 311 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 GIPC3Q8TF64 312 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 APOBEC4Q8WW27 367 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 HPSE2Q8WWQ2 592 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TCP11Q8WWU5 503 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 FCAMRQ8WWV6 532 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 SLC5A11Q8WWX8 675 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 SMPDL3AQ92484 453 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TM9SF4Q92544 642 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 DYRK2Q92630 601 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 WRAP53Q9BUR4 548 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TDRD1Q9BXT4 1180 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 TRIM6Q9C030 488 aaPredicted RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 POLR1EQ9GZS1 481 aaKnown RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 WWP1Q9H0M0 922 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 FAM124BQ9H5Z6 455 aaPredicted RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 C3orf14Q9HBI5 128 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 PALMDQ9NP74 551 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 UBE2TQ9NPD8 197 aaPredicted RBP3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 ATAD3AQ9NVI7 634 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 DCAF16Q9NXF7 216 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 POMT2Q9UKY4 750 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 HPCAL4Q9UM19 191 aa3.34□□□□□ -1.87
RNU6-27P-201ENST00000516146 DIMT1Q9UNQ2 313 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms