RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 RIOK2Q9BVS4 552 aaKnown RBP13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 EQTNQ9NQ60 294 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 PRAMEF33A0A0G2JMD5 474 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 B4GALT3O60512 393 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 PRAMEF10O60809 474 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 ATG13O75143 517 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 SERPINI2O75830 405 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 CAV3P56539 151 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 SPIN4Q56A73 249 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 RPS26P11Q5JNZ5 115 aaPredicted RBP13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 MACC1Q6ZN28 852 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 MARCH9Q86YJ5 346 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 DCAF4L2Q8NA75 395 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 UFD1Q92890 307 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 USP7Q93009 1102 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 MED28Q9H204 178 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 OSGEPL1Q9H4B0 414 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 IGFLR1Q9H665 355 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 REEP4Q9H6H4 257 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 NDUFAF4Q9P032 175 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 RPS3P23396 243 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 AOAHP28039 575 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 IDNKQ5T6J7 187 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 NXNL2Q5VZ03 156 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 FRMPD2BQ6IN97 320 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 LHFPL3Q86UP9 236 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 Q8N402 240 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 GATAD2BQ8WXI9 593 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 CLEC2DQ9UHP7 191 aa13.3□□□□□ -0.28
TSPAN17-208ENST00000514705 OR2B3O76000 313 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 CYP17A1P05093 508 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 GPX2P18283 190 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 TIA1P31483 386 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 GINS1Q14691 196 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 KLHL12Q53G59 568 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 COX20Q5RI15 118 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 CRTC1Q6UUV9 634 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 GALNT13Q8IUC8 556 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF366Q8N895 744 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 AUTS2Q8WXX7 1259 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 AP2M1Q96CW1 435 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 C11orf24Q96F05 449 aaPredicted RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF717Q9BY31 904 aaPredicted RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 RACGAP1Q9H0H5 632 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 NEDD8-MDP1E9PL57 170 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 HOXA9P31269 272 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 RPS19P39019 145 aaKnown RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 TAS2R41P59536 307 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 HBA1P69905 142 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF630Q2M218 657 aaPredicted RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZMAT1Q5H9K5 638 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 LAIR1Q6GTX8 287 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 VRK3Q8IV63 474 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ASB15Q8WXK1 588 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 TBX5Q99593 518 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 COQ3Q9NZJ6 369 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 MAN2B2Q9Y2E5 1009 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SLC16A8O95907 504 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 MAP2K3P46734 347 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 MLLT1Q03111 559 aaPredicted RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SLAMF1Q13291 335 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 CBX2Q14781 532 aaPredicted RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 LIPJQ5W064 366 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 C16orf62Q7Z3J2 963 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 LHX3Q9UBR4 397 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ADAM12O43184 909 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SSNA1O43805 119 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ELFN1P0C7U0 828 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 CR2P20023 1033 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 DPY19L3Q6ZPD9 716 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF614Q8N883 585 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ATP6V1C2Q8NEY4 427 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 SNAPC3Q92966 411 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 ARMC5Q96C12 935 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
TSPAN17-208ENST00000514705 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 TSPAN6O43657 245 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 CELP19835 753 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 CHMP24386 653 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 RAET1GQ6H3X3 334 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 REEP3Q6NUK4 255 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 OR7G3Q8NG95 312 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 LRR1Q96L50 414 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
TSPAN17-208ENST00000514705 HDHD5Q9BXW7 423 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms