RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 KCNA7Q96RP8 456 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 S100A13Q99584 98 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ATP13A2Q9NQ11 1180 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZDHHC2Q9UIJ5 367 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 RNF215Q9Y6U7 377 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PRSS51A0A1B0GVH4 220 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LILRA5A6NI73 299 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PRR33A8MZF0 331 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 FAM20BO75063 409 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PSIP1O75475 530 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 DLSTP36957 453 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MRPS15P82914 257 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 IL5RAQ01344 420 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LIPEQ05469 1076 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CDC73Q6P1J9 531 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF440Q8IYI8 595 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 DEPDC4Q8N2C3 294 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR2L3Q8NG85 312 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 WDR60Q8WVS4 1066 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF347Q96SE7 839 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 KLHL4Q9C0H6 718 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SLITRK2Q9H156 845 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 IL1RAPQ9NPH3 570 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 TRIM3O75382 744 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZFAND5O76080 213 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SLCO2B1O94956 709 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SEMA3DO95025 777 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 G6PDP11413 515 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ACADLP28330 430 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SLC5A2P31639 672 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MCCD1P59942 119 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 CCL7P80098 99 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ABRAXAS2Q15018 415 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 RCN1Q15293 331 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF630Q2M218 657 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 SLC9B1Q4ZJI4 515 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LIN52Q52LA3 116 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 GLYATQ6IB77 296 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR51Q1Q8NH59 317 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 NEIL2Q969S2 332 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MTERF3Q96E29 417 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 RMND5BQ96G75 393 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 UTP23Q9BRU9 249 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 NAA11Q9BSU3 229 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 ALG2Q9H553 416 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TBC1D29Q9UFV1 150 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ADAMTS6Q9UKP5 1117 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NOX1Q9Y5S8 564 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TRBV11-1A0A0K0K1C0 115 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TFECO14948 347 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 BCHEP06276 602 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 POU3F3P20264 500 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 DRD4P21917 467 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 KIR2DL1P43626 348 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 SRSF5Q13243 272 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 RCAN2Q14206 197 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 C18orf21Q32NC0 220 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 FAM91A1Q658Y4 838 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TMEM107Q6UX40 140 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 BHLHA9Q7RTU4 235 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 DGLUCYQ7Z3D6 616 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TOR1AIP2Q8NFQ8 470 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR10Q1Q8NGQ4 319 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 GRHL3Q8TE85 626 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 C16orf78Q8WTQ4 265 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SLC25A36Q96CQ1 311 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ECHDC3Q96DC8 303 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CLN6Q9NWW5 311 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MRPS2Q9Y399 296 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 AP4S1Q9Y587 144 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 IRGMA1A4Y4 181 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 RIIAD1A6NNX1 92 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TARM1B6A8C7 271 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CXCR6O00574 342 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 AREL1O15033 823 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SCAMP2O15127 329 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 ADAMDEC1O15204 470 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ITM2AO43736 263 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SCO2O43819 266 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PGCP20142 388 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 FOXK1P85037 733 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 RALGDSQ12967 914 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 EXT1Q16394 746 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CLPPQ16740 277 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 RAET1LQ5VY80 246 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PMS2CLQ68D20 193 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ISCA2Q86U28 154 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 UBE2J2Q8N2K1 259 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MEIOBQ8N635 442 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PROKR1Q8TCW9 393 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 DPH2Q9BQC3 489 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 RACGAP1Q9H0H5 632 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 SEMA4GQ9NTN9 838 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LIPT1Q9Y234 373 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PTPRFP10586 1907 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NPIPA5E9PKD4 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms