RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 APCDD1LQ8NCL9 501 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 M1APQ8TC57 530 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 PPP4R1Q8TF05 950 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 AGAP11Q8TF27 550 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 RGMAQ96B86 450 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 C19orf60Q96EN9 201 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 VPS50Q96JG6 964 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 TMEM109Q9BVC6 243 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 MRPL1Q9BYD6 325 aaKnown RBP17■□□□□ 0.31
CLDND1-220ENST00000508902 DDX31Q9H8H2 851 aaKnown RBP17■□□□□ 0.31
CLDND1-220ENST00000508902 MMP25Q9NPA2 562 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 PSD3Q9NYI0 1048 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 SLC17A7Q9P2U7 560 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 PCDHGA10Q9Y5H3 936 aa17■□□□□ 0.31
CLDND1-220ENST00000508902 HIVEP3Q5T1R4 2406 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 COL12A1Q99715 3063 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 SVILO95425 2214 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 A0A088AWK7 358 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 A0A1W2PR48 441 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 COPEO14579 308 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 PRKNO60260 465 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 ZNF10P21506 573 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 PTX3P26022 381 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 TPP2P29144 1249 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 ARL1P40616 181 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 HSD17B7P56937 341 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 GALNT1Q10472 559 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 SLAMF1Q13291 335 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 AP5B1Q2VPB7 878 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 DGAT2L6Q6ZPD8 337 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 HPS6Q86YV9 775 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 CRLF3Q8IUI8 442 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 SRFBP1Q8NEF9 429 aaKnown RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 REPS1Q96D71 796 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 APOPT1Q96IL0 206 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 LPAR4Q99677 370 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 TEX10Q9NXF1 929 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 G3BP2Q9UN86 482 aaKnown RBP16.99■□□□□ 0.31
CLDND1-220ENST00000508902 B3GNT3Q9Y2A9 372 aa16.99■□□□□ 0.31
CLDND1-220ENST00000508902 MANBAO00462 879 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 SPAG7O75391 227 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 SEMA3DO95025 777 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 WDPCPO95876 746 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 MYL2P10916 166 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 HPDP32754 393 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 RAP1GDS1P52306 607 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 NAGLUP54802 743 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 IGLV3-21P80748 117 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 TNFRSF17Q02223 184 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 TGM3Q08188 693 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 LCP2Q13094 533 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 ZNF468Q5VIY5 522 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 FRMD7Q6ZUT3 714 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 GPRIN3Q6ZVF9 776 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 SLC22A9Q8IVM8 553 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 C10orf107Q8IVU9 208 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 OR4N5Q8IXE1 308 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 SRRM1Q8IYB3 904 aaKnown RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 MMP21Q8N119 569 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 ZNF321PQ8N8H1 164 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 ADAMTS18Q8TE60 1221 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 MAGEB10Q96LZ2 347 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 LMF1Q96S06 567 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 ROGDIQ9GZN7 287 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 OXSMQ9NWU1 459 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 PPIEQ9UNP9 301 aaKnown RBP16.98■□□□□ 0.31
CLDND1-220ENST00000508902 PLLPQ9Y342 182 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 TIMM22Q9Y584 194 aa16.98■□□□□ 0.31
CLDND1-220ENST00000508902 ARHGAP10A1A4S6 786 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 PROM1O43490 865 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 CTNSO60931 367 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 MYO1DO94832 1006 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 AIFM1O95831 613 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 CPN2P22792 545 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ARRB2P32121 409 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 TSFMP43897 325 aaKnown RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ARFIP1P53367 373 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 DNAJB13P59910 316 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 IFT88Q13099 833 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 SLC13A2Q13183 592 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 INPP5JQ15735 1006 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 EXT1Q16394 746 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 CCDC153Q494R4 210 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 IQCKQ8N0W5 287 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 BEST3Q8N1M1 668 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 METTL4Q8N3J2 472 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ZADH2Q8N4Q0 377 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ARMC2Q8NEN0 867 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 PTPMT1Q8WUK0 201 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 SERPINI1Q99574 410 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 MECRQ9BV79 373 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ACPTQ9BZG2 426 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ROPN1BQ9BZX4 212 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 ROPN1Q9HAT0 212 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 KCNK13Q9HB14 408 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms