RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MRPS30Q9NP92 439 aaKnown RBP5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 MED4Q9NPJ6 270 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMEM184CQ9NVA4 438 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 OGFRQ9NZT2 677 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMEM216Q9P0N5 145 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 OPTCQ9UBM4 332 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 CLCA2Q9UQC9 943 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 BTRCQ9Y297 605 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 PTPRBP23467 1997 aa5.25□□□□□ -1.57
HMGB1P44-201ENST00000508597 KCNE1BA0A087WTH5 132 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCDC187A0A096LP49 1063 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PRAMEF33A0A0G2JMD5 474 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 IGHV5-10-1A0A0J9YXX1 117 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SPAARA0A1B0GVQ0 90 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 A0A1W2PPV9 198 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 B4E171 279 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 H3BML4 177 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 UBXN8O00124 270 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TXNDC9O14530 226 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CLGNO14967 610 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 BIRC5O15392 142 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TAPBPO15533 448 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SRPX2O60687 465 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TOX4O94842 621 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 MLYCDO95822 493 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 MYF5P13349 255 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 JUPP14923 745 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CPA3P15088 417 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 EZRP15311 586 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 UGT2B7P16662 529 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NPPBP16860 134 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NELFEP18615 380 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SERPINB1P30740 379 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HPDP32754 393 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CSTF2P33240 577 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TSPAN7P41732 249 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 GRIA3P42263 894 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CASP2P42575 452 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PGGT1BP53609 377 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TBPL1P62380 186 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HERVK_113P63132 956 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HSD11B2P80365 405 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CFHR1Q03591 330 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 GALNT1Q10472 559 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 E2F2Q14209 437 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 FASTKQ14296 549 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 IL11RAQ14626 422 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PDK4Q16654 411 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HIST2H2ACQ16777 129 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PFKFB4Q16877 469 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PGS1Q32NB8 556 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PTCHD3Q3KNS1 767 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 C3orf36Q3SXR2 165 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SPATS1Q496A3 300 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 GAGE13Q4V321 117 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PAGE2BQ5JRK9 111 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 MANEAQ5SRI9 462 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HES3Q5TGS1 186 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NKAIN2Q5VXU1 208 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 LIPMQ5VYY2 423 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 LIPJQ5W064 366 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 HIST2H2AA3Q6FI13 130 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 IRGCQ6NXR0 463 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 FIGLAQ6QHK4 219 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 DHRS13Q6UX07 377 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZYG11AQ6WRX3 759 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 THOC6Q86W42 341 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 LSMEM2Q8N112 164 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 KRT78Q8N1N4 520 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 D2HGDHQ8N465 521 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SPATA6LQ8N4H0 392 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PTGR2Q8N8N7 351 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCDC63Q8NA47 563 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TTLQ8NG68 377 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 OR4K1Q8NGD4 311 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 WDR36Q8NI36 951 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 FLVCR1-AS1Q8TAF5 88 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TCP10LQ8TDR4 215 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PPP4R1Q8TF05 950 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC5A11Q8WWX8 675 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 UBE2E3Q969T4 207 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 L3HYPDHQ96EM0 354 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 C1GALT1C1Q96EU7 318 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 WDR34Q96EX3 536 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 MED8Q96G25 268 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 IL17FQ96PD4 163 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TGM7Q96PF1 710 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TRAPPC9Q96Q05 1148 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TEFMQ96QE5 360 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 MAP3K3Q99759 626 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 AIF1LQ9BQI0 150 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NUDT22Q9BRQ3 303 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 EFCAB11Q9BUY7 163 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NTMT1Q9BV86 223 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 ERVK-6Q9BXR3 956 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 ATG10Q9H0Y0 220 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 XKR8Q9H6D3 395 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NT5DC2Q9H857 520 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 FANCEQ9HB96 536 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 DNAJC11Q9NVH1 559 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 395.3 ms