RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PKLRP30613 574 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR3A3P47888 321 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CLDN15P56746 228 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 KRTAP10-1P60331 282 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SSTP61278 116 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 GCNT1Q02742 428 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TAF10Q12962 218 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SCGB2A2Q13296 93 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CDH18Q13634 790 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 GIT2Q14161 759 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CEBPEQ15744 281 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 LDLRAP1Q5SW96 308 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 C20orf194Q5TEA3 1177 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 LCN1P1Q5VSP4 162 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRAMEF7Q5VXH5 474 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CD164L2Q6UWJ8 174 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRUNE1Q86TP1 453 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 PIGZQ86VD9 579 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TBC1D21Q8IYX1 336 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF843Q8N446 348 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SEPT8Q92599 483 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 C14orf79Q96F83 325 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 NDNQ99608 321 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRMT1Q99873 361 aaKnown RBP3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SPAG8Q99932 426 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ANP32EQ9BTT0 268 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TEX13BQ9BXU2 312 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ACPTQ9BZG2 426 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRPV6Q9H1D0 765 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 MARCH7Q9H992 704 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 PIGVQ9NUD9 493 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TMOD2Q9NZR1 351 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CLIP2Q9UDT6 1046 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 DUSP12Q9UNI6 340 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 RABL2BQ9UNT1 228 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 WDR37Q9Y2I8 494 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 TMED7Q9Y3B3 224 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 FAM205AQ6ZU69 1335 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SMCHD1A6NHR9 2005 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 CHUKO15111 745 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 EPHB6O15197 1021 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 CXCL14O95715 111 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 PDGFBP01127 241 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 TPM2P07951 284 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 MMP10P09238 476 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 PRKAR1AP10644 381 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 F3P13726 295 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 DARSP14868 501 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 HLA-FP30511 346 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 PITPNBP48739 271 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 MAZP56270 477 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 RPP38P78345 283 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 CCZ1BP86790 482 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 CCZ1P86791 482 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 MYL7Q01449 175 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 BTG3Q14201 252 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 HLA-BQ31612 363 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SPDYCQ5MJ68 293 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SUSD4Q5VX71 490 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 DLEU7Q6UYE1 221 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 LRRTM1Q86UE6 522 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 STHQ8IWL8 128 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 KLHDC1Q8N7A1 406 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 RNF149Q8NC42 400 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 DENND6BQ8NEG7 585 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR4C3Q8NH37 302 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 FBXO30Q8TB52 745 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SPATA18Q8TC71 538 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 U2AF1L4Q8WU68 220 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 ESAMQ96AP7 390 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 GUCD1Q96NT3 240 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 MAP3K3Q99759 626 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SSX3Q99909 188 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF577Q9BSK1 485 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 TPPP3Q9BW30 176 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 TMEM231Q9H6L2 316 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 DCLRE1BQ9H816 532 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 COQ10BQ9H8M1 238 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 KCNMB3Q9NPA1 279 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SDR39U1Q9NRG7 319 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 GRID1Q9ULK0 1009 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SNX6Q9UNH7 406 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 ERVK-19Q9WJR5 959 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 PLEKHA6Q9Y2H5 1048 aa3.58□□□□□ -1.84
TRAPPC13-209ENST00000508304 SYNJ2BP-COX16A0A087WUM0 186 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 TRIM64CA6NLI5 447 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 KPNA7A9QM74 516 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 H0YCG3 227 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 H3BMM5 538 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 OGTO15294 1046 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 PI15O43692 258 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 GMFGO60234 142 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 CLN5O75503 358 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 DFFBO76075 338 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 AK1P00568 194 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 PROS1P07225 676 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 NUDT17P0C025 328 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms