RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MAPK12P53778 367 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 EMP2P54851 167 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 TNFRSF17Q02223 184 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 NR6A1Q15406 480 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 UGT8Q16880 541 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 C6orf136Q5SQH8 315 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 BROXQ5VW32 411 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 C18orf63Q68DL7 685 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 NOXRED1Q6NXP6 359 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 QSOX2Q6ZRP7 698 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 MAVSQ7Z434 540 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 ZNF595Q8IYB9 648 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PRSS58Q8IYP2 241 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.47
TCOF1-210ENST00000506767 TM4SF18Q96CE8 201 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 MAELQ96JY0 434 aaKnown RBP12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 CRB3Q9BUF7 120 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 RBCK1Q9BYM8 510 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 NUF2Q9BZD4 464 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 RIC8BQ9NVN3 520 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 MARCOQ9UEW3 520 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-210ENST00000506767 GIMAP2Q9UG22 337 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 C3orf18Q9UK00 162 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 TMED5Q9Y3A6 229 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
TCOF1-210ENST00000506767 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 IGKV3D-11A0A0A0MRZ8 115 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ARHGAP10A1A4S6 786 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 TRPC5OSA6NMA1 111 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ZNF891A8MT65 544 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 TCP11X1B4DZS4 312 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 K7ENP7 123 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 SDHDO14521 159 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 PCDH17O14917 1159 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 NKX2-8O15522 239 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 B4GALT2O60909 372 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 PEX11AO75192 247 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 CDC123O75794 336 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 HEXBP07686 556 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ANXA4P09525 319 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 FURINP09958 794 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ACPPP15309 386 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ALOX15P16050 662 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 GSTM5P46439 218 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 UCNP55089 124 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 HSD17B7P56937 341 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 BTG2P78543 158 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 MC1RQ01726 317 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 GALNTL6Q49A17 601 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 ATP6AP1LQ52LC2 224 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 INO80CQ6PI98 192 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 CCDC81Q6ZN84 652 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 FAM47EQ6ZV65 393 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 LARP4Q71RC2 724 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 FAM47BQ8NA70 645 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 C16orf78Q8WTQ4 265 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 TUBGCP3Q96CW5 907 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 EBPLQ9BY08 206 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 AKTIPQ9H8T0 292 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 PRDM9Q9NQV7 894 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 DLGAP4Q9Y2H0 992 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 POLR3HQ9Y535 204 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-210ENST00000506767 USH1CQ9Y6N9 552 aa12.08□□□□□ -0.48
TCOF1-210ENST00000506767 URB1O60287 2271 aaKnown RBP12.07□□□□□ -0.48
TCOF1-210ENST00000506767 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 A0A1W2PQ72 361 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 CLDN4O14493 209 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 SOCS6O14544 535 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 PRMT3O60678 531 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 CTNSO60931 367 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 ALOX12BO75342 701 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 VPS4BO75351 444 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 MYO1DO94832 1006 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 TGDSO95455 350 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 AIFM1O95831 613 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 APC2O95996 2303 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 TLX1P31314 330 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-210ENST00000506767 BUD31P41223 144 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-210ENST00000506767 TMPRSS3P57727 454 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 TAS2R50P59544 299 aa12.07□□□□□ -0.48
TCOF1-210ENST00000506767 RPL38P63173 70 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms