RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 DDX31Q9H8H2 851 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 BRF2Q9HAW0 419 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 SLC12A4Q9UP95 1085 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 ZNF451Q9Y4E5 1061 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 TIMM22Q9Y584 194 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 PCDHGB7Q9Y5F8 929 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 CTIFO43310 598 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 TRIM13O60858 407 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 PRKRAO75569 313 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 KRT6AP02538 564 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 GBAP04062 536 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 KRT6BP04259 564 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 PPP2R1BP30154 601 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 HMOX2P30519 316 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 KRT6CP48668 564 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 CD97P48960 835 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 NAA20P61599 178 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 TBL3Q12788 808 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 PLAG1Q6DJT9 500 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 NUDT13Q86X67 352 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 METTL4Q8N3J2 472 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 PGM2Q96G03 612 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 ACPTQ9BZG2 426 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 SHCBP1LQ9BZQ2 653 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 G3BP2Q9UN86 482 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 MRPS33Q9Y291 106 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 ATG4BQ9Y4P1 393 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 ASB4Q9Y574 426 aa17.1■□□□□ 0.33
PDLIM7-216ENST00000506537 MYOCOSA0A1B0GUC4 107 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 B8ZZF3 427 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 CPN2P22792 545 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 TPP2P29144 1249 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 SOX11P35716 441 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 SLC26A5P58743 744 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 TNFRSF17Q02223 184 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 C19orf57Q0VDD7 668 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 GALNT1Q10472 559 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 SLC13A2Q13183 592 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 RCN2Q14257 317 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 BTBD16Q32M84 506 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 C18orf63Q68DL7 685 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 RIPOR1Q6ZS17 1223 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 GPR180Q86V85 440 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 RBMXL3Q8N7X1 1067 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 LPAR4Q99677 370 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 SSU72Q9NP77 194 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 LYARQ9NX58 379 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 C5AR2Q9P296 337 aa17.09■□□□□ 0.33
PDLIM7-216ENST00000506537 CPAMD8Q8IZJ3 1885 aa17.08■□□□□ 0.33
PDLIM7-216ENST00000506537 A0A1W2PR48 441 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 SAGE2PA6NJ88 616 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 A8MUA0 341 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 CLDN4O14493 209 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 CTNSO60931 367 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 LDB3O75112 727 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 ULK1O75385 1050 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 ALPPP05187 535 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 FAM58BPP0C7Q3 252 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 HSD3B1P14060 373 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 HSD3B2P26439 372 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 CSTF3Q12996 717 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 MPP2Q14168 576 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 NADK2Q4G0N4 442 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 ZCCHC23Q6ZST2 131 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 COMMD6Q7Z4G1 85 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 CROCCP2Q86T23 111 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 SIRT6Q8N6T7 355 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 NFAM1Q8NET5 270 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 ANKRD9Q96BM1 317 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 AGAP4Q96P64 663 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 TEX10Q9NXF1 929 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 PTGFRNQ9P2B2 879 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 PHF11Q9UIL8 331 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 SPACA6W5XKT8 324 aa17.08■□□□□ 0.32
PDLIM7-216ENST00000506537 SUV39H1O43463 412 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 PROM1O43490 865 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 FGF17O60258 216 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 AIFM1O95831 613 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 KLK1P06870 262 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 CHRNGP07510 517 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 BPGMP07738 259 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 ICAM2P13598 275 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 SERPINB3P29508 390 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 ARRB2P32121 409 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 HMGCS1Q01581 520 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 ID2Q02363 134 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 KLRB1Q12918 225 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 CASP8Q14790 479 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 EXT1Q16394 746 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 JMJD6Q6NYC1 403 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 CYP20A1Q6UW02 462 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 IGFL2Q6UWQ7 119 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 IGFL3Q6UXB1 125 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms