RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PSMB5P28074 263 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 ELAVL3Q14576 367 aaKnown RBP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 TNFAIP8L2Q6P589 184 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 CEACAM20Q6UY09 585 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 RTL10Q7L3V2 364 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 HORMAD2Q8N7B1 307 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 ANKRD53Q8N9V6 530 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 AQP11Q8NBQ7 271 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 RAD51AP1Q96B01 352 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 NEURL2Q9BR09 285 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 DSN1Q9H410 356 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 TM7SF3Q9NS93 570 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 TAS2R16Q9NYV7 291 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 C5AR2Q9P296 337 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 ICKQ9UPZ9 632 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 C2orf16Q68DN1 1984 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KRBA1A5PL33 1030 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 HEPACAM2A8MVW5 462 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 FFAR1O14842 300 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 VEGFDO43915 354 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 CCNB2O95067 398 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 IFNA14P01570 189 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 BCHEP06276 602 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ADRA2AP08913 450 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DDCP20711 480 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KELP23276 732 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 CTSKP43235 329 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 CLK1P49759 484 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DGKEP52429 567 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 HMGA2P52926 109 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 LIM2P55344 173 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF234Q14588 700 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 PTGES3Q15185 160 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KLHL17Q6TDP4 642 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ERN2Q76MJ5 926 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 PAGE2Q7Z2X7 111 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 MMAAQ8IVH4 418 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DCUN1D3Q8IWE4 304 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DENND6BQ8NEG7 585 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF675Q8TD23 568 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 APOBEC4Q8WW27 367 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 F2RL3Q96RI0 385 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 PSD2Q9BQI7 771 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 NLNQ9BYT8 704 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF556Q9HAH1 456 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DUSP12Q9UNI6 340 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 FEZF1A0PJY2 475 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 GASTP01350 101 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 IFNW1P05000 195 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ERGP11308 486 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 RHCEP18577 417 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 BSGP35613 385 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ALDH9A1P49189 494 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 MAPK12P53778 367 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 CRISP3P54108 245 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 TMEM52BQ4KMG9 183 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 SOWAHCQ53LP3 525 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KHDRBS2Q5VWX1 349 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 SAXO2Q658L1 398 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF770Q6IQ21 691 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 REEP3Q6NUK4 255 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 DEPDC4Q8N2C3 294 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 MCFD2Q8NI22 146 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 SLC38A5Q8WUX1 472 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 TFGQ92734 400 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 TM4SF18Q96CE8 201 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 PDXPQ96GD0 296 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 COX14Q96I36 57 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 MS4A8Q9BY19 250 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 NMNAT1Q9HAN9 279 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 IMPAD1Q9NX62 359 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 MS4A12Q9NXJ0 267 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 FTSJ1Q9UET6 329 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 KCND3Q9UK17 655 aa9.39□□□□□ -0.91
CLIP1-204ENST00000501271 FAM32AQ9Y421 112 aaKnown RBP9.39□□□□□ -0.91
CLIP1-204ENST00000501271 ANKDD1BA6NHY2 528 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 TLL1O43897 1013 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 B4GALT2O60909 372 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 SEMA7AO75326 666 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 TGM1P22735 817 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 CHMP24386 653 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 OPRD1P41143 372 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 P2RY2P41231 377 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 GJA8P48165 433 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 TEKQ02763 1124 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 HSPB3Q12988 150 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 DNASE1L3Q13609 305 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 IRF3Q14653 427 aa9.38□□□□□ -0.91
CLIP1-204ENST00000501271 DEPDC1Q5TB30 811 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms