RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PRKAA1Q13131 559 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 P2RY14Q15391 338 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SFRP5Q5T4F7 317 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZYG11AQ6WRX3 759 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPRIN3Q6ZVF9 776 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MRPL10Q7Z7H8 261 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ETFBKMTQ8IXQ9 262 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 VWA5B2Q8N398 1253 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RYBPQ8N488 228 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PAPD5Q8NDF8 572 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 WDR36Q8NI36 951 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC38A4Q969I6 547 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CEP19Q96LK0 163 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 QRFPRQ96P65 431 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RBBP8Q99708 897 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 FRMD8P1Q9BZ68 369 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 POMKQ9H5K3 350 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM96AQ9H5X1 160 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PAK6Q9NQU5 681 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 TMEM161AQ9NX61 479 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPR160Q9UJ42 338 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 LIPT1Q9Y234 373 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 BTRCQ9Y297 605 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PEX16Q9Y5Y5 336 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRBV23OR9-2A0A075B6M9 112 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 BCLAF3A2AJT9 711 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 I6L893 689 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 H2AFYO75367 372 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CNPP09543 421 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PEPDP12955 493 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 HSD17B1P14061 328 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC2A4P14672 509 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RAB3AP20336 220 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CHRNA4P43681 627 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RNF144AP50876 292 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 KCNQ1P51787 676 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 DGKEP52429 567 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CAPZA1P52907 286 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PAN3Q58A45 887 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC35F1Q5T1Q4 408 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PDZK1Q5T2W1 519 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF470Q6ECI4 717 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CUZD1Q86UP6 607 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR8K5Q8NH50 307 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 TEX47Q8TBZ9 253 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF431Q8TF32 576 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 DNAJA4Q8WW22 397 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 EXT2Q93063 718 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 AHCYL2Q96HN2 611 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RHOVQ96L33 236 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SORCS2Q96PQ0 1159 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ARHGAP9Q9BRR9 750 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 COPZ2Q9P299 210 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PPIEQ9UNP9 301 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 NEUROG3Q9Y4Z2 214 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PIKFYVEQ9Y2I7 2098 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 MFSD2BA6NFX1 497 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 CLDN24A6NM45 220 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 ANKRD28O15084 1053 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 GALR2O43603 387 aaPredicted RBP5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM20BO75063 409 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 SIX6O95475 246 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 C1RP00736 705 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 APOC3P02656 99 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 SOD2P04179 222 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 HMGN1P05114 100 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 GALTP07902 379 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 ANKRD34CP0C6C1 535 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM157BP0CG42 384 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 GJA1P17302 382 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 IGFBP4P22692 258 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 PTPN3P26045 913 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR1E1P30953 314 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 HOXA9P31269 272 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 NUP62P37198 522 aaPredicted RBP5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 CTSKP43235 329 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 DIO1P49895 249 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 VSX2P58304 361 aaPredicted RBP5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 TIGD6Q17RP2 521 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 MPEG1Q2M385 716 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 RFX4Q33E94 735 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 KRTCAP3Q53RY4 240 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 CARD16Q5EG05 197 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 TPGS2Q68CL5 300 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 ERICH5Q6P6B1 374 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 DENND6AQ8IWF6 608 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 AMER2Q8N7J2 671 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 BOLLQ8N9W6 283 aaKnown RBP5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 KLHL6Q8WZ60 621 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 SAMD11Q96NU1 681 aa5.53□□□□□ -1.52
SOX2-OT-218ENST00000498731 QKIQ96PU8 341 aaKnown RBP eCLIP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms