RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FAM9CQ8IZT9 166 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 TMEM132CQ8N3T6 1108 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 LIX1Q8N485 282 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 GPR87Q9BY21 358 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 CCDC86Q9H6F5 360 aaKnown RBP20.52■□□□□ 0.88
C9orf3-222ENST00000496567 MYNNQ9NPC7 610 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 CROTQ9UKG9 612 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 VSTM2BA6NLU5 285 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 CYR61O00622 381 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 CLDN4O14493 209 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 NR2F6P10588 404 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 VWA2Q5GFL6 755 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 NDUFAF5Q5TEU4 345 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 IKBIPQ70UQ0 350 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 ZC3H7AQ8IWR0 971 aaKnown RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 ZNF595Q8IYB9 648 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 FAM47BQ8NA70 645 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 GATA6Q92908 595 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 KIAA1143Q96AT1 154 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 ELAC2Q9BQ52 826 aaKnown RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 KCND3Q9UK17 655 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 FARSAQ9Y285 508 aaKnown RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 A0A1W2PR48 441 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 UBDO15205 165 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 IL3P08700 152 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 TACR1P25103 407 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 DLSTP36957 453 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 KLC1Q07866 573 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 DNASE1L3Q13609 305 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 SPATA21Q7Z572 469 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 ENDOVQ8N8Q3 282 aaKnown RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 CDC26Q8NHZ8 85 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 TSSK3Q96PN8 268 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 CSF3RQ99062 836 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 EFHD1Q9BUP0 239 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 RPF2Q9H7B2 306 aaKnown RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 PRDM9Q9NQV7 894 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 TEX10Q9NXF1 929 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-222ENST00000496567 TRIM33Q9UPN9 1127 aa20.51■□□□□ 0.87
C9orf3-222ENST00000496567 LOC101059948A0A1B0GTJ6 334 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 C1orf226A1L170 272 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 E9PBE3 544 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 FAM227AF5H4B4 570 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 KLHL41O60662 606 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 AIFM1O95831 613 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 ALDOCP09972 364 aaKnown RBP20.5■□□□□ 0.87
C9orf3-222ENST00000496567 G6PDP11413 515 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 DRD2P14416 443 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 IDO1P14902 403 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 DIO3P55073 304 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 C2orf80Q0P641 193 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 SF3A3Q12874 501 aaKnown RBP eCLIP20.5■□□□□ 0.878e-10■■■□□ 16.8
C9orf3-222ENST00000496567 ERV3-1Q14264 604 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 GSTA3Q16772 222 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 MFSD4BQ5TF39 518 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 C18orf63Q68DL7 685 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 ZNF248Q8NDW4 579 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 SNIP1Q8TAD8 396 aaKnown RBP20.5■□□□□ 0.87
C9orf3-222ENST00000496567 RBCK1Q9BYM8 510 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 AIG1Q9NVV5 245 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 BAIAP2L1Q9UHR4 511 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 PCDHA9Q9Y5H5 950 aa20.5■□□□□ 0.87
C9orf3-222ENST00000496567 AHCTF1Q8WYP5 2266 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 B4GALT2O60909 372 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 CNOT3O75175 753 aaKnown RBP20.49■□□□□ 0.87
C9orf3-222ENST00000496567 JRKO75564 520 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 HSD17B7P56937 341 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 RPS6KA2Q15349 733 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 TGIF1Q15583 401 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 MINDY4Q4G0A6 757 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 METTL21CQ5VZV1 264 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 FAM71E1Q6IPT2 247 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 SHISA5Q8N114 240 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 OR2Y1Q8NGV0 311 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 TANKQ92844 425 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 EGLN2Q96KS0 407 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 SPSB2Q99619 263 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 SOX17Q9H6I2 414 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-222ENST00000496567 LANCL2Q9NS86 450 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 MKL2Q9ULH7 1088 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 MAPRE3Q9UPY8 281 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 PTRH2Q9Y3E5 179 aaKnown RBP20.49■□□□□ 0.87
C9orf3-222ENST00000496567 MMACHCQ9Y4U1 282 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 PCDHGA6Q9Y5G7 932 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 AKAP13Q12802 2813 aa20.49■□□□□ 0.87
C9orf3-222ENST00000496567 TERTO14746 1132 aaKnown RBP20.48■□□□□ 0.87
C9orf3-222ENST00000496567 SNX3O60493 162 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 CDC123O75794 336 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-222ENST00000496567 KLF7O75840 302 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-222ENST00000496567 CYC1P08574 325 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 PTPN4P29074 926 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 PPP2R1BP30154 601 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 FOLR3P41439 243 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 IRX1P78414 480 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-222ENST00000496567 TMEM198Q66K66 360 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 OR52E8Q6IFG1 317 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 QSOX2Q6ZRP7 698 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 CLNKQ7Z7G1 428 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms