RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	MEDAG	Q5VYS4	303 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ATG9B	Q674R7	924 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	H3F3C	Q6NXT2	135 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LGI4	Q8N135	537 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KLHL36	Q8N4N3	616 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF561	Q8N587	486 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPATA22	Q8NHS9	363 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	STK35	Q8TDR2	534 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC25A46	Q96AG3	418 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	REPS1	Q96D71	796 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IL4I1	Q96RQ9	567 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CCM2	Q9BSQ5	444 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC25A32	Q9H2D1	315 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UCK1	Q9HA47	277 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RCOR3	Q9P2K3	495 aa	Predicted RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LOC390937	A0A1W2PQ73	354 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TCRBV16S1A1N1	A0A5B0	115 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LRIT2	A6NDA9	550 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DCLK1	O15075	740 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TCRB	P04435	133 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SCG5	P05408	212 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CBSL	P0DN79	551 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AGTR1	P30556	359 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CBS	P35520	551 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MNDA	P41218	407 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC1A2	P43004	574 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GCGR	P47871	477 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DAP	P51397	102 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SEZ6	Q53EL9	994 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRSS36	Q5K4E3	855 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NLGN2	Q8NFZ4	835 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR2L5	Q8NG80	312 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR10H5	Q8NGA6	315 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NEIL3	Q8TAT5	605 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TFAP2B	Q92481	460 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GTPBP3	Q969Y2	492 aa	Known RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HRASLS5	Q96KN8	279 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CXorf58	Q96LI9	332 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LMAN2L	Q9H0V9	348 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CDCP1	Q9H5V8	836 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GLOD4	Q9HC38	313 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MED9	Q9NWA0	146 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC6A14	Q9UN76	642 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KCNK7	Q9Y2U2	307 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DMRT1	Q9Y5R6	373 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	COL1A1	P02452	1464 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LRRN3	E7EW58	273 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PSMD9	O00233	223 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBFD1	O14562	309 aa	Known RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ADAM10	O14672	748 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC31A2	O15432	143 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPX5	O75715	221 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SIX3	O95343	332 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GLP2R	O95838	553 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPARC	P09486	303 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GIF	P27352	417 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RIDA	P52758	137 aa	Known RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FABP9	Q0Z7S8	132 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TWF1	Q12792	350 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF234	Q14588	700 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GFOD2	Q3B7J2	385 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LBH	Q53QV2	105 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CELF3	Q5SZQ8	465 aa	Known RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LCLAT1	Q6UWP7	414 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PDZD3	Q86UT5	571 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CPXCR1	Q8N123	301 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	STPG2	Q8N412	459 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM46D	Q8NEK8	389 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR5B17	Q8NGF7	314 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR6B3	Q8NGW1	331 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C3orf30	Q96M34	536 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PEBP4	Q96S96	227 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EDEM2	Q9BV94	578 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MFF	Q9GZY8	342 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TOLLIP	Q9H0E2	274 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LRRN3	Q9H3W5	708 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NANS	Q9NR45	359 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RNF146	Q9NTX7	359 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ASF1B	Q9NVP2	202 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TAS2R13	Q9NYV9	303 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TSPAN16	Q9UKR8	245 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KLF2	Q9Y5W3	355 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTGDR2	Q9Y5Y4	395 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AUP1	Q9Y679	476 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HYKK	A2RU49	373 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549		J3KR12	359 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RGS11	O94810	467 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRSS23	O95084	383 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ESR1	P03372	595 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRKCG	P05129	697 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LPL	P06858	475 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARSA	P15289	507 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPR176	Q14439	515 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LGALSL	Q3ZCW2	172 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRAMEF19	Q5SWL8	479 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KDM4D	Q6B0I6	523 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	USP53	Q70EK8	1073 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FOXRED2	Q8IWF2	684 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms