RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PNPP00491 289 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 CALCAP01258 141 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 EPOP01588 193 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 CHRNGP07510 517 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 LYNP07948 512 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 HMOX1P09601 288 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 PCP11498 1178 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 OXTRP30559 389 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 CAPGP40121 348 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 FHITP49789 147 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 TNFSF10P50591 281 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 SMSP52788 366 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 UCP2P55851 309 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 KCNK10P57789 538 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 ARF5P84085 180 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 MS4A2Q01362 244 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 MFGE8Q08431 387 aaPredicted RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 NPRL3Q12980 569 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 RPA4Q13156 261 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 KNOP1Q1ED39 458 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 GLIPR1L2Q4G1C9 344 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 SLC10A5Q5PT55 438 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 CAPN13Q6MZZ7 669 aaPredicted RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 CDHR3Q6ZTQ4 885 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 SIDT2Q8NBJ9 832 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 OR6F1Q8NGZ6 308 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 RNASE8Q8TDE3 154 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 CHPT1Q8WUD6 406 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 SNX21Q969T3 373 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 ALKBH3Q96Q83 286 aaPredicted RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 S1PR3Q99500 378 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 NTMT1Q9BV86 223 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 NUSAP1Q9BXS6 441 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 MRPL9Q9BYD2 267 aaKnown RBP3.23□□□□□ -1.89
CD46-216ENST00000490278 EGLN1Q9GZT9 426 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 MARCH7Q9H992 704 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 PANK3Q9H999 370 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 PLEKHA3Q9HB20 300 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 NMUR1Q9HB89 426 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 DNAJC11Q9NVH1 559 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 COMMD8Q9NX08 183 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 EXOC7Q9UPT5 735 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 OR1A2Q9Y585 309 aa3.23□□□□□ -1.89
CD46-216ENST00000490278 SHISA7A6NL88 538 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 ARHGEF33A8MVX0 844 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 ZNF749O43361 778 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 CPNE6O95741 557 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 CD1DP15813 335 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 FERP16591 822 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 CYP3A5P20815 502 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 SRPXP78539 464 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 UBXN1Q04323 297 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 PAX8Q06710 450 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 ACTN3Q08043 901 aaPredicted RBP3.22□□□□□ -1.89
CD46-216ENST00000490278 RAPSNQ13702 412 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 MEF2DQ14814 521 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 STX1AQ16623 288 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 PAQR6Q6TCH4 344 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 ZNF730Q6ZMV8 503 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 MCM10Q7L590 875 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 KCNMB4Q86W47 210 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 C17orf64Q86WR6 236 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 RNF130Q86XS8 419 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 TBC1D10CQ8IV04 446 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 SERPINA12Q8IW75 414 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 FBXW8Q8N3Y1 598 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 SFRP1Q8N474 314 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 UBTD2Q8WUN7 234 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 STRADBQ9C0K7 418 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 TUBB1Q9H4B7 451 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 WDR41Q9HAD4 459 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 FAM212BQ9NTI7 297 aaPredicted RBP3.22□□□□□ -1.89
CD46-216ENST00000490278 PAK5Q9P286 719 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 CTSZQ9UBR2 303 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 SNX5Q9Y5X3 404 aa3.22□□□□□ -1.89
CD46-216ENST00000490278 OR5H15A6NDH6 313 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 TMCO5BA8MYB1 307 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 DDX39AO00148 427 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 GMNNO75496 209 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 CSDE1O75534 798 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 PRDM1O75626 825 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 CT45A8P0DMV1 189 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 CT45A9P0DMV2 189 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 VDRP11473 427 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 B4GALT1P15291 398 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 ZNF10P21506 573 aaPredicted RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 GPX3P22352 226 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 GLRA1P23415 457 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 STIP1P31948 543 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 ZFP36L2P47974 494 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 NDUFV3P56181 108 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 PDE7AQ13946 482 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 GK2Q14410 553 aaPredicted RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 LASP1Q14847 261 aaKnown RBP3.21□□□□□ -1.9
CD46-216ENST00000490278 HEPACAMQ14CZ8 416 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 OR1C1Q15619 314 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 ECSCRQ19T08 205 aa3.21□□□□□ -1.9
CD46-216ENST00000490278 SNAI3Q3KNW1 292 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms