RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GRID2O43424 1007 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 BUD23O43709 281 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 B4GALT4O60513 344 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 N4BP1O75113 896 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PAHP00439 452 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CTSAP10619 480 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PRG2P13727 222 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SYT1P21579 422 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 COMTP21964 271 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 GLRA1P23415 457 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 YY1P25490 414 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ITGA3P26006 1051 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 STIP1P31948 543 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CLDN8P56748 225 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ZP1P60852 638 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ACTR3P61158 418 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SP3Q02447 781 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 HNRNPDQ14103 355 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SELPLGQ14242 412 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 HSDL1Q3SXM5 330 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MPPE1Q53F39 396 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PRAMEF19Q5SWL8 479 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 WDR88Q6ZMY6 472 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SPATA24Q86W54 205 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TDRPQ86YL5 185 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 APLFQ8IW19 511 aaPredicted RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 NANPQ8TBE9 248 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 FAM168AQ92567 244 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 VCPIP1Q96JH7 1222 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PRMT6Q96LA8 375 aaPredicted RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 NDNQ99608 321 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 GAL3ST1Q99999 423 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PCGF1Q9BSM1 259 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 C1QTNF7Q9BXJ2 289 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PKIBQ9C010 78 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SEMA4CQ9C0C4 833 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TLE6Q9H808 572 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 AATFQ9NY61 560 aaKnown RBP eCLIP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 UBAP1Q9NZ09 502 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 IRAK3Q9Y616 596 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 DOCK2Q92608 1830 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TRDMT1O14717 391 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 LIN7AO14910 233 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 B4GALT2O60909 372 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 RNF8O76064 485 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MOCS3O95396 460 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NCF1P14598 390 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ITGB6P18564 788 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TACR3P29371 465 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ALDH1B1P30837 517 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 DUTP33316 252 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PRKCIP41743 596 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SLC1A6P48664 564 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 FNTAP49354 379 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 RAB9AP51151 201 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PSMD7P51665 324 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CLDN18P56856 261 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ELAVL3Q14576 367 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TATDN3Q17R31 274 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CFAP157Q5JU67 520 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ENTPD8Q5MY95 495 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 BEND6Q5SZJ8 279 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PRAMEF20Q5VT98 475 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MIS18BP1Q6P0N0 1132 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PEG10Q86TG7 708 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 GLYATL2Q8WU03 294 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ARHGAP45Q92619 1136 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NAPBQ9H115 298 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 WDR76Q9H967 626 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TMEM161AQ9NX61 479 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 C6orf203Q9P0P8 240 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PIPOXQ9P0Z9 390 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 BAIAP2L1Q9UHR4 511 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ERRFI1Q9UJM3 462 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SLC25A13Q9UJS0 675 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TNRC6CQ9HCJ0 1690 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TCHHQ07283 1943 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MYH14Q7Z406 1995 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SERTM2A0A1B0GWG4 89 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SLC22A23A1A5C7 686 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 DENND3A2RUS2 1198 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 VPS37CA5D8V6 355 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NKX6-3A6NJ46 265 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NPIPB6E9PJ23 425 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 EIF3HO15372 352 aaKnown RBP eCLIP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PFDN1O60925 122 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CABYRO75952 493 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 KRT36O76013 467 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 IGHEP01854 428 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SERPING1P05155 500 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ANPEPP15144 967 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 LBPP18428 481 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 AOC1P19801 751 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CCKBRP32239 447 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SORDQ00796 357 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 EZH2Q15910 746 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 BCL7AQ4VC05 210 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 FAM76BQ5HYJ3 339 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 AADACL4Q5VUY2 407 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 RGMBQ6NW40 437 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms