RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR52B6Q8NGF0 335 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 NSMAFQ92636 917 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM41AQ96HV5 264 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 P2RY13Q9BPV8 354 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 HMGB3O15347 200 aaKnown RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 RNF13O43567 381 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 HPRP00739 348 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 PLGP00747 810 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GSTT2P0CG29 244 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 SRCP12931 536 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GPM6BQ13491 265 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 IRF5Q13568 498 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 OCLNQ16625 522 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 UPP1Q16831 310 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 SPRED3Q2MJR0 410 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 BLOC1S3Q6QNY0 202 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 UBE2Q1Q7Z7E8 422 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 SCGB3A2Q96PL1 93 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 HERPUD2Q9BSE4 406 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 MCCC2Q9HCC0 563 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 SDHAF3Q9NRP4 125 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TBCCD1Q9NVR7 557 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TAS2R9Q9NYW1 312 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 C14orf166Q9Y224 244 aaKnown RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 LTN1O94822 1766 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 MED1Q15648 1581 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TTC34A8MYJ7 566 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 WASH3PC4AMC7 463 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 C11orf98E9PRG8 122 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 PRMT3O60678 531 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 NAA10P41227 235 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GNG2P59768 71 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 LIPJQ5W064 366 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 RASGRP3Q8IV61 690 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 FCAMRQ8WWV6 532 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GAS2L1Q99501 681 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 MON2Q7Z3U7 1717 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TOXO94900 526 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 CD9P21926 228 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF181Q2M3W8 571 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 ZSWIM9Q86XI8 627 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TSTD1Q8NFU3 115 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 RHEBL1Q8TAI7 183 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 STOML3Q8TAV4 291 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 TP63Q9H3D4 680 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 ACSL6Q9UKU0 697 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 PRELID1Q9Y255 219 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 DISC1C4P0D8 188 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 CA12O43570 354 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MEDAGQ5VYS4 303 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 FAM217AQ8IXS0 508 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 Q8N402 240 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 TSPEARQ8WU66 669 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 FUNDC2Q9BWH2 189 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF696Q9H7X3 374 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 EPOP01588 193 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 GP1BBP13224 206 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 ARSDP51689 593 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 PMS2P3Q13401 168 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MLIPQ5VWP3 458 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 LRRC69Q6ZNQ3 347 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 ABI3Q9P2A4 366 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 SOX1O00570 391 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 RFC2P35250 354 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 GRM2Q14416 872 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 FLYWCH1Q4VC44 716 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 ARHGAP40Q5TG30 622 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 SLC27A4Q6P1M0 643 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 CEACAM19Q7Z692 300 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 Q8N9G6 341 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 SECISBP2Q96T21 854 aaKnown RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MKS1Q9NXB0 559 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 CDC14AQ9UNH5 594 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 PCDHGB6Q9Y5F9 930 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MITFO75030 526 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 AOC2O75106 756 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 F2P00734 622 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 GRPRP30550 384 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 KDELR2P33947 212 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 NKX2-5P52952 324 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 OR51A7Q8NH64 312 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 HSPA12BQ96MM6 686 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 GPR83Q9NYM4 423 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 FAAHO00519 579 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 DENRO43583 198 aaKnown RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MAPK3P27361 379 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 NPRL3Q12980 569 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MINDY1Q8N5J2 469 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 OR4K17Q8NGC6 315 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 IL17FQ96PD4 163 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MRPL15Q9P015 296 aaKnown RBP16.92■□□□□ 0.3
NPHP4-209ENST00000489180 MAFFQ9ULX9 164 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms