RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HIPK1Q86Z02 1210 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 ZNF713Q8N859 430 aaPredicted RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 BANPQ8N9N5 519 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 GPR148Q8TDV2 347 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 RUNDC3BQ96NL0 473 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 DESI2Q9BSY9 194 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 RBM24Q9BX46 236 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 SLC39A8Q9C0K1 460 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 MTIF3Q9H2K0 278 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 MARCH7Q9H992 704 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 TNFRSF19Q9NS68 423 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 GMEB2Q9UKD1 530 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 VSIG4Q9Y279 399 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 TMED7Q9Y3B3 224 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 SNX5Q9Y5X3 404 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 BICDL2A1A5D9 508 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 ILVBLA1L0T0 632 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 TRIM49BA6NDI0 452 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 TRIM64A6NGJ6 449 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 TRIM64BA6NI03 449 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 ZNF724A8MTY0 619 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 E9PAM4 449 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 SCO2O43819 266 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 FRAT2O75474 233 aaPredicted RBP2.73□□□□□ -1.97
RFC4-213ENST00000489028 KLK2P20151 261 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 GJB2P29033 226 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 FKBP1BP68106 108 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 YWHAHQ04917 246 aaPredicted RBP2.73□□□□□ -1.97
RFC4-213ENST00000489028 RBBP4Q09028 425 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 CETN1Q12798 172 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 CEACAM7Q14002 265 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 Q1RN00 199 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 TWISTNBQ3B726 338 aaPredicted RBP2.73□□□□□ -1.97
RFC4-213ENST00000489028 ZRANB3Q5FWF4 1079 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 SLC10A5Q5PT55 438 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 MPP7Q5T2T1 576 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 PM20D1Q6GTS8 502 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 BAIAP2L2Q6UXY1 529 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 RFPL4BQ6ZWI9 263 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 PHLDB2Q86SQ0 1253 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 ANKRD46Q86W74 232 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 DZIP1Q86YF9 867 aaKnown RBP2.73□□□□□ -1.97
RFC4-213ENST00000489028 CCDC170Q8IYT3 715 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 SIX6OS1Q8N1H7 587 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 CHCHD4Q8N4Q1 142 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 TMEM99Q8N816 258 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 UXS1Q8NBZ7 420 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 OR6T1Q8NGN1 323 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 OR13C5Q8NGS8 318 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 OR6F1Q8NGZ6 308 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 KIAA1524Q8TCG1 905 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 MRAPQ8TCY5 172 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 CORO2AQ92828 525 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 CCDC43Q96MW1 224 aaKnown RBP2.73□□□□□ -1.97
RFC4-213ENST00000489028 RANBP9Q96S59 729 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 ATG101Q9BSB4 218 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 PDRG1Q9NUG6 133 aa2.73□□□□□ -1.97
RFC4-213ENST00000489028 PFASO15067 1338 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 A0A0U1RQK1 487 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 TEX48A0A1B0GUV7 120 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ZNF320A2RRD8 509 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 CCDC162PA2VCL2 907 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 H0YIG0 161 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 IFIT3O14879 490 aaKnown RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 CTDSPLO15194 276 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ZNF253O75346 499 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 RLN1P04808 185 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ACKR3P25106 362 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 RPL9P32969 192 aaKnown RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 MATKP42679 507 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 KCNJ1P48048 391 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 NDPQ00604 133 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 SLMAPQ14BN4 828 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 MORF4L2Q15014 288 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 PCK2Q16822 640 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 TYSND1Q2T9J0 566 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 RFTN2Q52LD8 501 aaPredicted RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 NHSL2Q5HYW2 709 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ATAD3CQ5T2N8 411 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ZNF776Q68DI1 518 aaPredicted RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 RFWD3Q6PCD5 774 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 IYDQ6PHW0 289 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 PIWIL3Q7Z3Z3 882 aaKnown RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 NUFIP2Q7Z417 695 aaKnown RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 NLRP14Q86W24 1093 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 CACUL1Q86Y37 369 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 HSCBQ8IWL3 235 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 C11orf42Q8N5U0 333 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 C10orf53Q8N6V4 93 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 SEPT8Q92599 483 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 DNASE1L2Q92874 299 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 MR1Q95460 341 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 CCM2Q9BSQ5 444 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 MLPHQ9BV36 600 aaPredicted RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 LSG1Q9H089 658 aaKnown RBP2.72□□□□□ -1.97
RFC4-213ENST00000489028 ABCB10Q9NRK6 738 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 ZNF446Q9NWS9 450 aa2.72□□□□□ -1.97
RFC4-213ENST00000489028 DHRS4-AS1Q9P1J3 65 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms