RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TIA1P31483 386 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ARFIP1P53367 373 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 MAPK12P53778 367 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 RPL38P63173 70 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 RAE1P78406 368 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ID2Q02363 134 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF33BQ06732 778 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ACSM2AQ08AH3 577 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 SSPNQ14714 243 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 NR6A1Q15406 480 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 XKR7Q5GH72 579 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CCNYL2Q5T2Q4 361 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ACSM2BQ68CK6 577 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 C18orf63Q68DL7 685 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 MRM1Q6IN84 353 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 KIRREL2Q6UWL6 708 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 QSOX2Q6ZRP7 698 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 GPR155Q7Z3F1 870 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CLYBLQ8N0X4 340 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 MMP21Q8N119 569 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 OR11G2Q8NGC1 345 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CDC26Q8NHZ8 85 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ADAMTS18Q8TE60 1221 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 DYDC1Q8WWB3 177 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 EXTL1Q92935 676 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 PPP1R36Q96LQ0 422 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 TRIM55Q9BYV6 548 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 MANSC1Q9H8J5 431 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CLK4Q9HAZ1 481 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 PRTFDC1Q9NRG1 225 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 INTS9Q9NV88 658 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 PNPOQ9NVS9 261 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 LYARQ9NX58 379 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 P4HTMQ9NXG6 502 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 AHSPQ9NZD4 102 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 PHF11Q9UIL8 331 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CCL27Q9Y4X3 112 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 POLR3HQ9Y535 204 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 SPACA6W5XKT8 324 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 FAM208BQ5VWN6 2430 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 IGKV3D-11A0A0A0MRZ8 115 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 MYOCOSA0A1B0GUC4 107 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ATP6AP2A0A1C7CYW4 349 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 GNG14A0A1W2PPG7 69 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 A0A1W2PR48 441 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 SERTM1A2A2V5 107 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 GLOD5A6NK44 160 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 PRMT3O60678 531 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 LDB3O75112 727 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 SNNO75324 88 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ATP6AP2O75787 350 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 SEC24DO94855 1032 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-210ENST00000488228 IGHEP01854 428 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 FGF4P08620 206 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 IL10P22301 178 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 PPP2R1BP30154 601 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 OCRLQ01968 901 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 SLC13A2Q13183 592 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 TBR1Q16650 682 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 GALNTL6Q49A17 601 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 SPIN4Q56A73 249 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 HSP90B2PQ58FF3 399 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 TMEM205Q6UW68 189 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 RNF165Q6ZSG1 346 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 PAGE2Q7Z2X7 111 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ANKRD37Q7Z713 158 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 GPR180Q86V85 440 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 TRIM42Q8IWZ5 723 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 RAB3IL1Q8TBN0 382 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 CHTF18Q8WVB6 975 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 METTL21AQ8WXB1 218 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 UCN3Q969E3 161 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 C19orf60Q96EN9 201 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 C3orf30Q96M34 536 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 PTCHD1Q96NR3 888 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ILKAPQ9H0C8 392 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 ADAM29Q9UKF5 820 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 MRPS33Q9Y291 106 aaKnown RBP10.38□□□□□ -0.75
UBE4B-210ENST00000488228 MMACHCQ9Y4U1 282 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 CLDN16Q9Y5I7 305 aa10.38□□□□□ -0.75
UBE4B-210ENST00000488228 IGHV1-45A0A0A0MS14 117 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 SLC28A1O00337 649 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 PEX12O00623 359 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 LSM1O15116 133 aaKnown RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 RGS14O43566 566 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 FGF17O60258 216 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 CELA2AP08217 269 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 IL3P08700 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms