RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 OR4C11Q6IEV9 310 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 CRLF3Q8IUI8 442 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 PLD6Q8N2A8 252 aaKnown RBP6.55□□□□□ -1.36
VPS50-218ENST00000485994 TMEM132CQ8N3T6 1108 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 SLC5A8Q8N695 610 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 TEX9Q8N6V9 391 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 ACOT4Q8N9L9 421 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 SNX31Q8N9S9 440 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 MDS2Q8NDY4 140 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 B3GNT7Q8NFL0 401 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 OR8K3Q8NH51 312 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 WDR20Q8TBZ3 569 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 ACMSDQ8TDX5 336 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 SSC4DQ8WTU2 575 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 NR4A3Q92570 626 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 TSLPQ969D9 159 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 RGMAQ96B86 450 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 REPS1Q96D71 796 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 SCMH1Q96GD3 660 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 MAGEB10Q96LZ2 347 aaPredicted RBP6.55□□□□□ -1.36
VPS50-218ENST00000485994 F2RL3Q96RI0 385 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 TAAR6Q96RI8 345 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 PAFAH2Q99487 392 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 NPAS2Q99743 824 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 MRPL57Q9BQC6 102 aaKnown RBP6.55□□□□□ -1.36
VPS50-218ENST00000485994 UTP23Q9BRU9 249 aaKnown RBP6.55□□□□□ -1.36
VPS50-218ENST00000485994 TXLNGYQ9BZA5 131 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-218ENST00000485994 DDX31Q9H8H2 851 aaKnown RBP6.55□□□□□ -1.36
VPS50-218ENST00000485994 IPPKQ9H8X2 491 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 PRTFDC1Q9NRG1 225 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 PLA2G3Q9NZ20 509 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 EML6Q6ZMW3 1958 aa6.55□□□□□ -1.36
VPS50-218ENST00000485994 ZNF407Q9C0G0 2248 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 NINQ8N4C6 2090 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 MAST4O15021 2626 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 NOTCH2Q04721 2471 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 A8MUI8 341 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 RIPK2O43353 540 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 PROM1O43490 865 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 CDC123O75794 336 aaPredicted RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 CLDN9O95484 217 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ACSL3O95573 720 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 LDLRP01130 860 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 TGFB1P01137 390 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 SP1P08047 785 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 SBK3P0C264 359 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GP1BBP13224 206 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GFAPP14136 432 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 MAOAP21397 527 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GCAP28676 217 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GALNSP34059 522 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 HLCSP50747 726 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 TDGF1P3P51864 188 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 OLR1P78380 273 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 IGLV3-21P80748 117 aaPredicted RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 ZNF33BQ06732 778 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 MRPL49Q13405 166 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 TUBA3CQ13748 450 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 BMPR2Q13873 1038 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GTF2H2Q13888 395 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ELOAQ14241 798 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 RASA2Q15283 850 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 NR6A1Q15406 480 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ELAVL1Q15717 326 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 GGTA1PQ4G0N0 100 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ZNF766Q5HY98 468 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 UBAP2Q5T6F2 1119 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 SLC25A25Q6KCM7 469 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GTF2H2CQ6P1K8 395 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 TUBA3EQ6PEY2 450 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 FAM180AQ6UWF9 173 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ZNF793Q6ZN11 406 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 GOLGA7Q7Z5G4 137 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ZCCHC7Q8N3Z6 543 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 MORN4Q8NDC4 146 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 HUS1BQ8NHY5 278 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 PRR7Q8TB68 274 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 TRPC4APQ8TEL6 797 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 THAP3Q8WTV1 239 aaPredicted RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 PTPMT1Q8WUK0 201 aaPredicted RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 CCT6BQ92526 530 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 TANKQ92844 425 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 DAZLQ92904 295 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 RELTQ969Z4 430 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 CNDP1Q96KN2 507 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 CENPKQ9BS16 269 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ALOXE3Q9BYJ1 711 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 DEFB126Q9BYW3 111 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 VPS11Q9H270 941 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 L2HGDHQ9H9P8 463 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 COPS7BQ9H9Q2 264 aaPredicted RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 PPCSQ9HAB8 311 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ADAP2Q9NPF8 381 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 ZNF358Q9NW07 568 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 LUZP4Q9P127 313 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms