RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HSDL2Q6YN16 418 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 PSD4Q8NDX1 1056 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 STAG3L4Q8TBR4 150 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF473Q8WTR7 871 aaKnown RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ASB5Q8WWX0 329 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ASB15Q8WXK1 588 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CSF3RQ99062 836 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 HPF1Q9NWY4 346 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 COQ3Q9NZJ6 369 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 NUDT4Q9NZJ9 180 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ADGRE2Q9UHX3 823 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 RNF112Q9ULX5 631 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ERVK-11Q9UQG0 969 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CCDC189A1A4V9 331 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ZNHIT1O43257 154 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 HS6ST1O60243 411 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 OR2J2O76002 312 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CNR1P21554 472 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 HK2P52789 917 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 GPX6P59796 221 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 IGLV3-21P80748 117 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CHIT1Q13231 466 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 NAB1Q13506 487 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ARHGAP11AQ6P4F7 1023 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CAPN12Q6ZSI9 719 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 C3orf62Q6ZUJ4 267 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CLNKQ7Z7G1 428 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CD163Q86VB7 1156 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 OR2M7Q8NG81 312 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ESAMQ96AP7 390 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 RASL10BQ96S79 203 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 TP63Q9H3D4 680 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ZDHHC11Q9H8X9 412 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 NMRAL1Q9HBL8 299 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 DEPPQ9NTK1 212 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 PPT2Q9UMR5 302 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 TSC22D4Q9Y3Q8 395 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CCNT2O60583 730 aaKnown RBP10.63□□□□□ -0.71
SCFD1-206ENST00000484733 PIAS1O75925 651 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 GLSO94925 669 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-206ENST00000484733 IFNA16P05015 189 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 TPOP07202 933 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 POU3F2P20265 443 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ARFIP1P53367 373 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CAV1Q03135 178 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 STX4Q12846 297 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 NDUFAF5Q5TEU4 345 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ADNP2Q6IQ32 1131 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 MED27Q6P2C8 311 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF793Q6ZN11 406 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 RTL4Q6ZR62 310 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CHSY3Q70JA7 882 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ISCA2Q86U28 154 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 MARVELD2Q8N4S9 558 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ACOT4Q8N9L9 421 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 GOLM1Q8NBJ4 401 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 OR52N2Q8NGI0 321 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 OR5L2Q8NGL0 311 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ANKRD9Q96BM1 317 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SDCCAG3Q96C92 435 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 MAPKAP1Q9BPZ7 522 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SPACA6W5XKT8 324 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ABCA12Q86UK0 2595 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 FANCGO15287 622 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 OR6B1O95007 311 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 IGHG3P01860 377 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 APCP25054 2843 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CRABP2P29373 138 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 RFC3P40938 356 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SOX3P41225 446 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 MSH2P43246 934 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 RNF4P78317 190 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 HYAL4Q2M3T9 481 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 IL20RBQ6UXL0 311 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CCDC91Q7Z6B0 441 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SPATA4Q8NEY3 305 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SLC2A12Q8TD20 617 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CA5BP1Q8WTZ4 195 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 CMTM7Q96FZ5 175 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 ATOH8Q96SQ7 321 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 FAM173AQ9BQD7 235 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 DPH5Q9H2P9 285 aa10.63□□□□□ -0.71
SCFD1-206ENST00000484733 A0A1B0GVC2 190 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 PINLYPA6NC86 204 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 C17orf105B2RV13 164 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 K7EPI3 171 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 ACOT7O00154 380 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 RAD51CO43502 376 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 KERAO60938 352 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 SLC35E2BP0CK96 405 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 HIST1H1TP22492 207 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 GPR85P60893 370 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 PPIAP62937 165 aaKnown RBP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 DLG1Q12959 904 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 MPEG1Q2M385 716 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 AP5B1Q2VPB7 878 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms