RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 HSD11B1P28845 292 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 HOXC9P31274 260 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TIA1P31483 386 aaKnown RBP eCLIP3.35□□□□□ -1.873e-7■■■■■ 33.7
FNDC3B-209ENST00000478016 CDH5P33151 784 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CD79BP40259 229 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 VIPR2P41587 438 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TMPOP42166 694 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 NPY2RP49146 381 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 HOXA1P49639 335 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 NDUFV1P49821 464 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PNLIPRP2P54317 469 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PRKAG1P54619 331 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 AP3S2P59780 193 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CXCR4P61073 352 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RPS15P62841 145 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 BST1Q10588 318 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM115Q12893 351 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 NAE1Q13564 534 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 LTB4RQ15722 352 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 EIF2S3LQ2VIR3 472 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DEFB115Q30KQ5 88 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ANKRD55Q3KP44 614 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 USP41Q3LFD5 358 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TAF1BQ53T94 588 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF766Q5HY98 468 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 COQ5Q5HYK3 327 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RABGAP1LQ5R372 815 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 C9orf50Q5SZB4 431 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.35□□□□□ -1.873e-7■■■■■ 57.8
FNDC3B-209ENST00000478016 PLCXD3Q63HM9 321 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM91A1Q658Y4 838 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ATG9BQ674R7 924 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DENND1BQ6P3S1 775 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF530Q6P9A1 599 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CCDC137Q6PK04 289 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 METTL7BQ6UX53 244 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 WASH2PQ6VEQ5 465 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 WDR88Q6ZMY6 472 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 KCTD8Q6ZWB6 473 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CYP4Z1Q86W10 505 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SERPINA12Q8IW75 414 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC8AQ8IWT6 810 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ARHGAP12Q8IWW6 846 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SELENOHQ8IZQ5 122 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ABRAQ8N0Z2 381 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PDIK1LQ8N165 341 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC75A-AS1Q8N1F1 130 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 UBE2J2Q8N2K1 259 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC44A3Q8N4M1 653 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RNF148Q8N7C7 305 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TTC29Q8NA56 475 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 BEND2Q8NDZ0 799 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 STKLD1Q8NE28 680 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM71CQ8NEG0 241 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM46DQ8NEK8 389 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DDHD1Q8NEL9 900 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR4C5Q8NGB2 326 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2D3Q8NGH3 330 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR52B4Q8NGK2 314 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR5D18Q8NGL1 313 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR13C9Q8NGT0 318 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR10J5Q8NHC4 309 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 C9orf43Q8TAL5 461 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TBC1D16Q8TBP0 767 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTL9Q8TC94 416 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC35F5Q8WV83 523 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RASSF5Q8WWW0 418 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PHYHIPQ92561 330 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 P3H4Q92791 437 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CAVIN3Q969G5 261 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MTBPQ96DY7 904 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DTD2Q96FN9 168 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PDXPQ96GD0 296 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PBKQ96KB5 322 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PRRT1Q99946 306 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PELOQ9BRX2 385 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 HTATIP2Q9BUP3 242 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SEMA4CQ9C0C4 833 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ZMYND12Q9H0C1 365 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB1BQ9H0U4 201 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OPN3Q9H1Y3 402 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MED20Q9H944 212 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 EBF2Q9HAK2 575 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MLXIPLQ9NP71 852 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 KLHL1Q9NR64 748 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MRPS18AQ9NVS2 196 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RMND1Q9NWS8 449 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PACSIN3Q9UKS6 424 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 AGO1Q9UL18 857 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RPH3ALQ9UNE2 315 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC12A4Q9UP95 1085 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SPATA31A5Q5VU36 1347 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SPATA31A7Q8IWB4 1347 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 WDR33Q9C0J8 1336 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CNTNAP2Q9UHC6 1331 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RFX7Q2KHR2 1363 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms