RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KLHL6Q8WZ60 621 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM80Q96HE8 168 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PKP4Q99569 1192 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 WRAP53Q9BUR4 548 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PRM3Q9NNZ6 103 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 KCND3Q9UK17 655 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 MAPRE3Q9UPY8 281 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 B4DXG7 233 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 AGRPO00253 132 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PLD2O14939 933 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 KLHL18O94889 574 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SLCO2B1O94956 709 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 ARAFP10398 606 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CHRNB1P11230 501 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 DAB2P98082 770 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 HOXC5Q00444 222 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SCN1BQ07699 218 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SEC23BQ15437 767 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 ZNF630Q2M218 657 aaPredicted RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CCDC58Q4VC31 144 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 FAM131AQ6UXB0 335 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PHC2Q8IXK0 858 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 RDH10Q8IZV5 341 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 RSPO3Q9BXY4 272 aaPredicted RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC22A4Q9H015 551 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SLA2Q9H6Q3 261 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 RC3H2Q9HBD1 1191 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PPIL1Q9Y3C6 166 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 KIAA1671Q9BY89 1806 aa12.4□□□□□ -0.43
PDZRN3-205ENST00000466780 OR2AG2A6NM03 316 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 PSIP1O75475 530 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CDRT1O95170 752 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 LATS1O95835 1130 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 FURINP09958 794 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 BDKRB1P46663 353 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 LRRC74AQ0VAA2 488 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TAF12Q16514 161 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TMEM201Q5SNT2 666 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 LIPKQ5VXJ0 399 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TRIM40Q6P9F5 258 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TAGAPQ8N103 731 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 LILRA3Q8N6C8 439 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ARL14EPQ8N8R7 260 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 APOBEC4Q8WW27 367 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CXorf40BQ96DE9 158 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 POLR2J2Q9GZM3 115 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SUV39H2Q9H5I1 410 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 B4GALT6Q9UBX8 382 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 GPR37L1O60883 481 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SEMA7AO75326 666 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC16A8O95907 504 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 IFNW1P05000 195 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 YES1P07947 543 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MSL3P1P0C860 447 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 OSMP13725 252 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF91Q05481 1191 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 NCF4Q15080 339 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 FLYWCH1Q4VC44 716 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 IER5LQ5T953 404 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MEDAGQ5VYS4 303 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 COMMD6Q7Z4G1 85 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CREB3L4Q8TEY5 395 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ASZ1Q8WWH4 475 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 NEIL2Q969S2 332 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC25A46Q96AG3 418 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 NDOR1Q9UHB4 597 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 DOCK6Q96HP0 2047 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CCDC182A6NF36 153 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SAP18O00422 153 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SEC14L5O43304 696 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 IFNA14P01570 189 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CSF2P04141 144 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 ALPPP05187 535 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MYL9P24844 172 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 IMPA1P29218 277 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CHI3L1P36222 383 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 PREPP48147 710 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 CD83Q01151 205 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 PDE7AQ13946 482 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 E2F2Q14209 437 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 VEPH1Q14D04 833 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC35F1Q5T1Q4 408 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 C12orf73Q69YU5 71 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SLCO4C1Q6ZQN7 724 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms