RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SSPNQ14714 243 aa15.07■□□□□ 0
GPC1-207ENST00000466624 GALNTL6Q49A17 601 aa15.07■□□□□ 0
GPC1-207ENST00000466624 RFTN2Q52LD8 501 aaPredicted RBP15.07■□□□□ 0
GPC1-207ENST00000466624 C6orf136Q5SQH8 315 aa15.07■□□□□ 0
GPC1-207ENST00000466624 BROXQ5VW32 411 aa15.07■□□□□ 0
GPC1-207ENST00000466624 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
GPC1-207ENST00000466624 PLPP5Q8NEB5 264 aa15.07■□□□□ 0
GPC1-207ENST00000466624 C7orf57Q8NEG2 295 aa15.07■□□□□ 0
GPC1-207ENST00000466624 STON2Q8WXE9 905 aa15.07■□□□□ 0
GPC1-207ENST00000466624 STARD8Q92502 1023 aa15.07■□□□□ 0
GPC1-207ENST00000466624 SIKE1Q9BRV8 207 aa15.07■□□□□ 0
GPC1-207ENST00000466624 SOX17Q9H6I2 414 aaPredicted RBP15.07■□□□□ 0
GPC1-207ENST00000466624 WDR41Q9HAD4 459 aa15.07■□□□□ 0
GPC1-207ENST00000466624 ASIC5Q9NY37 505 aa15.07■□□□□ 0
GPC1-207ENST00000466624 ATG4BQ9Y4P1 393 aa15.07■□□□□ 0
GPC1-207ENST00000466624 GNG14A0A1W2PPG7 69 aa15.06■□□□□ 0
GPC1-207ENST00000466624 IDSB3KWA1 339 aa15.06■□□□□ 0
GPC1-207ENST00000466624 CLDN4O14493 209 aa15.06■□□□□ 0
GPC1-207ENST00000466624 SDHDO14521 159 aa15.06■□□□□ 0
GPC1-207ENST00000466624 PEX11AO75192 247 aa15.06■□□□□ 0
GPC1-207ENST00000466624 JRKO75564 520 aa15.06■□□□□ 0
GPC1-207ENST00000466624 UMODP07911 640 aa15.06■□□□□ 0
GPC1-207ENST00000466624 ANXA4P09525 319 aaPredicted RBP15.06■□□□□ 0
GPC1-207ENST00000466624 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
GPC1-207ENST00000466624 NR2F6P10588 404 aa15.06■□□□□ 0
GPC1-207ENST00000466624 PCSK2P16519 638 aa15.06■□□□□ 0
GPC1-207ENST00000466624 RPS18P62269 152 aaKnown RBP15.06■□□□□ 0
GPC1-207ENST00000466624 RHAGQ02094 409 aa15.06■□□□□ 0
GPC1-207ENST00000466624 TLE3Q04726 772 aa15.06■□□□□ 0
GPC1-207ENST00000466624 EMX2Q04743 252 aa15.06■□□□□ 0
GPC1-207ENST00000466624 OGFOD2Q6N063 350 aa15.06■□□□□ 0
GPC1-207ENST00000466624 IKBIPQ70UQ0 350 aa15.06■□□□□ 0
GPC1-207ENST00000466624 LARP4Q71RC2 724 aaKnown RBP eCLIP15.06■□□□□ 0
GPC1-207ENST00000466624 MAVSQ7Z434 540 aa15.06■□□□□ 0
GPC1-207ENST00000466624 LAPTM4BQ86VI4 370 aa15.06■□□□□ 0
GPC1-207ENST00000466624 SCUBE1Q8IWY4 988 aa15.06■□□□□ 0
GPC1-207ENST00000466624 SHISA5Q8N114 240 aa15.06■□□□□ 0
GPC1-207ENST00000466624 FAM47BQ8NA70 645 aa15.06■□□□□ 0
GPC1-207ENST00000466624 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.06■□□□□ 0
GPC1-207ENST00000466624 TM4SF18Q96CE8 201 aa15.06■□□□□ 0
GPC1-207ENST00000466624 CSF3RQ99062 836 aa15.06■□□□□ 0
GPC1-207ENST00000466624 CRB3Q9BUF7 120 aa15.06■□□□□ 0
GPC1-207ENST00000466624 FAIM2Q9BWQ8 316 aa15.06■□□□□ 0
GPC1-207ENST00000466624 VN1R1Q9GZP7 353 aa15.06■□□□□ 0
GPC1-207ENST00000466624 AKTIPQ9H8T0 292 aa15.06■□□□□ 0
GPC1-207ENST00000466624 MYNNQ9NPC7 610 aa15.06■□□□□ 0
GPC1-207ENST00000466624 TEX10Q9NXF1 929 aaPredicted RBP15.06■□□□□ 0
GPC1-207ENST00000466624 C3orf18Q9UK00 162 aa15.06■□□□□ 0
GPC1-207ENST00000466624 MKL2Q9ULH7 1088 aa15.06■□□□□ 0
GPC1-207ENST00000466624 POLR3HQ9Y535 204 aaPredicted RBP15.06■□□□□ 0
GPC1-207ENST00000466624 MRPS18BQ9Y676 258 aaKnown RBP15.06■□□□□ 0
GPC1-207ENST00000466624 A0A1W2PR48 441 aa15.05■□□□□ -0
GPC1-207ENST00000466624 C1orf226A1L170 272 aa15.05■□□□□ -0
GPC1-207ENST00000466624 ZNF891A8MT65 544 aaPredicted RBP15.05■□□□□ -0
GPC1-207ENST00000466624 FAM227AF5H4B4 570 aa15.05■□□□□ -0
GPC1-207ENST00000466624 AIFM1O95831 613 aa15.05■□□□□ -0
GPC1-207ENST00000466624 HEXBP07686 556 aa15.05■□□□□ -0
GPC1-207ENST00000466624 PRPS2P11908 318 aa15.05■□□□□ -0
GPC1-207ENST00000466624 DRD2P14416 443 aa15.05■□□□□ -0
GPC1-207ENST00000466624 LBPP18428 481 aa15.05■□□□□ -0
GPC1-207ENST00000466624 MMP11P24347 488 aa15.05■□□□□ -0
GPC1-207ENST00000466624 PPP2R1BP30154 601 aa15.05■□□□□ -0
GPC1-207ENST00000466624 EMP2P54851 167 aa15.05■□□□□ -0
GPC1-207ENST00000466624 ERVK-8P63133 956 aa15.05■□□□□ -0
GPC1-207ENST00000466624 SRSF6Q13247 344 aaKnown RBP15.05■□□□□ -0
GPC1-207ENST00000466624 ERV3-1Q14264 604 aa15.05■□□□□ -0
GPC1-207ENST00000466624 HEPACAMQ14CZ8 416 aa15.05■□□□□ -0
GPC1-207ENST00000466624 UGT8Q16880 541 aa15.05■□□□□ -0
GPC1-207ENST00000466624 MINDY4Q4G0A6 757 aa15.05■□□□□ -0
GPC1-207ENST00000466624 NDUFAF5Q5TEU4 345 aa15.05■□□□□ -0
GPC1-207ENST00000466624 TMEM205Q6UW68 189 aa15.05■□□□□ -0
GPC1-207ENST00000466624 EPGNQ6UW88 154 aa15.05■□□□□ -0
GPC1-207ENST00000466624 RAB43Q86YS6 212 aa15.05■□□□□ -0
GPC1-207ENST00000466624 FNDC5Q8NAU1 212 aa15.05■□□□□ -0
GPC1-207ENST00000466624 ZSCAN1Q8NBB4 408 aa15.05■□□□□ -0
GPC1-207ENST00000466624 ACTRT2Q8TDY3 377 aa15.05■□□□□ -0
GPC1-207ENST00000466624 ADAMTS17Q8TE56 1095 aa15.05■□□□□ -0
GPC1-207ENST00000466624 C16orf78Q8WTQ4 265 aa15.05■□□□□ -0
GPC1-207ENST00000466624 TANKQ92844 425 aa15.05■□□□□ -0
GPC1-207ENST00000466624 IP6K3Q96PC2 410 aa15.05■□□□□ -0
GPC1-207ENST00000466624 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
GPC1-207ENST00000466624 EBPLQ9BY08 206 aa15.05■□□□□ -0
GPC1-207ENST00000466624 RBCK1Q9BYM8 510 aa15.05■□□□□ -0
GPC1-207ENST00000466624 RPF2Q9H7B2 306 aaKnown RBP15.05■□□□□ -0
GPC1-207ENST00000466624 PRTFDC1Q9NRG1 225 aa15.05■□□□□ -0
GPC1-207ENST00000466624 DLGAP4Q9Y2H0 992 aa15.05■□□□□ -0
GPC1-207ENST00000466624 PCDHA9Q9Y5H5 950 aa15.05■□□□□ -0
GPC1-207ENST00000466624 IGKV3D-11A0A0A0MRZ8 115 aa15.04■□□□□ -0
GPC1-207ENST00000466624 A0A1W2PQ72 361 aa15.04■□□□□ -0
GPC1-207ENST00000466624 EFSO43281 561 aa15.04■□□□□ -0
GPC1-207ENST00000466624 PRMT3O60678 531 aa15.04■□□□□ -0
GPC1-207ENST00000466624 B4GALT2O60909 372 aa15.04■□□□□ -0
GPC1-207ENST00000466624 CTNSO60931 367 aa15.04■□□□□ -0
GPC1-207ENST00000466624 ALOX12BO75342 701 aa15.04■□□□□ -0
GPC1-207ENST00000466624 SDC1P18827 310 aa15.04■□□□□ -0
GPC1-207ENST00000466624 EPHA3P29320 983 aa15.04■□□□□ -0
GPC1-207ENST00000466624 ASMTP46597 345 aa15.04■□□□□ -0
GPC1-207ENST00000466624 HNRNPFP52597 415 aaKnown RBP15.04■□□□□ -0
GPC1-207ENST00000466624 EFNA3P52797 238 aa15.04■□□□□ -0
GPC1-207ENST00000466624 TAS2R50P59544 299 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms