RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 ADGRE2Q9UHX3 823 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 ASB1Q9Y576 335 aa13.37□□□□□ -0.27
SNRNP40-203ENST00000463988 TACC2O95359 2948 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 TFECO14948 347 aaPredicted RBP13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 CLDN14O95500 239 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 TUBB4AP04350 444 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 IFNA16P05015 189 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 LTA4HP09960 611 aaKnown RBP13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 MSH2P43246 934 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 GUCY2DQ02846 1103 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 STX4Q12846 297 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 BMPR2Q13873 1038 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 MED27Q6P2C8 311 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 HSDL2Q6YN16 418 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 RAPH1Q70E73 1250 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 CHSY3Q70JA7 882 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 MDGA2Q7Z553 956 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 FGD2Q7Z6J4 655 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 AGAP11Q8TF27 550 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 PTPMT1Q8WUK0 201 aaPredicted RBP13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 DMRTA2Q96SC8 542 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 ATOH8Q96SQ7 321 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 IGSF5Q9NSI5 407 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 MYOTQ9UBF9 498 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 SPACA6W5XKT8 324 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 CACNA1CQ13936 2221 aa13.36□□□□□ -0.27
SNRNP40-203ENST00000463988 SYCE1LA8MT33 242 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 A8MVJ9 347 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 K7EPI3 171 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ADAM10O14672 748 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 PRKNO60260 465 aaPredicted RBP13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 FAM155BO75949 473 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 OR2J2O76002 312 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 COX6B1P14854 86 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 CASQ1P31415 396 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 HSF1Q00613 529 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 DLG1Q12959 904 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 BIKQ13323 160 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 SLMAPQ14BN4 828 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 AP5B1Q2VPB7 878 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ZDHHC24Q6UX98 284 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ZNF793Q6ZN11 406 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ZNF572Q7Z3I7 529 aaPredicted RBP13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 GDF7Q7Z4P5 450 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 CMC1Q7Z7K0 106 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 OR7G3Q8NG95 312 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 RHEBL1Q8TAI7 183 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 EXT2Q93063 718 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 HPF1Q9NWY4 346 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 OPTCQ9UBM4 332 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 ACOT9Q9Y305 439 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 TSC22D4Q9Y3Q8 395 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 FBN2P35556 2912 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 OTOGQ6ZRI0 2925 aa13.35□□□□□ -0.27
SNRNP40-203ENST00000463988 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 PDZD2O15018 2839 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 SUPT3HO75486 399 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 EPB42P16452 691 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 PTGER1P34995 402 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 PTGS2P35354 604 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 PIK3CBP42338 1070 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 ARFIP1P53367 373 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 IGLV3-21P80748 117 aaPredicted RBP13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 CMPK2Q5EBM0 449 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 DEPDC1Q5TB30 811 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 KHDRBS2Q5VWX1 349 aaKnown RBP13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 RGS9BPQ6ZS82 235 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 CCDC25Q86WR0 208 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 OR5L2Q8NGL0 311 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 FAM57AQ8TBR7 257 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 SGCZQ96LD1 299 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 RASL10BQ96S79 203 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 MAPKAP1Q9BPZ7 522 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 POLQO75417 2590 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 CCDC168Q8NDH2 2452 aa13.34□□□□□ -0.27
SNRNP40-203ENST00000463988 A0A087X1B8 175 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 UBXN8O00124 270 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 HS6ST1O60243 411 aa13.33□□□□□ -0.28
SNRNP40-203ENST00000463988 TGFB1P01137 390 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms