RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 LGI4Q8N135 537 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 KIF2BQ8N4N8 673 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 SUN3Q8TAQ9 357 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 BARD1Q99728 777 aaKnown RBP21.04■□□□□ 0.96
TRAF4-207ENST00000461195 ERVK-6Q9BXR3 956 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 DCDC2Q9UHG0 476 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 FBXW2Q9UKT8 454 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 PPT2Q9UMR5 302 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 NTNG1Q9Y2I2 539 aa21.04■□□□□ 0.96
TRAF4-207ENST00000461195 CPN2P22792 545 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 SLCO1A2P46721 670 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 CDH13P55290 713 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 C10orf62Q5T681 223 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-207ENST00000461195 FRG2Q64ET8 278 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 RPS27LQ71UM5 84 aaKnown RBP21.03■□□□□ 0.96
TRAF4-207ENST00000461195 TDRPQ86YL5 185 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 ZCCHC7Q8N3Z6 543 aaKnown RBP21.03■□□□□ 0.96
TRAF4-207ENST00000461195 B3GNT7Q8NFL0 401 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 OR4F6Q8NGB9 312 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 MTFMTQ96DP5 389 aaKnown RBP21.03■□□□□ 0.96
TRAF4-207ENST00000461195 FRG2BQ96QU4 278 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 NPAS2Q99743 824 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 ADAP2Q9NPF8 381 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 MS4A12Q9NXJ0 267 aa21.03■□□□□ 0.96
TRAF4-207ENST00000461195 A0A1W2PPM1 405 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 DLX3O60479 287 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 ATP5F1P24539 256 aaPredicted RBP21.02■□□□□ 0.96
TRAF4-207ENST00000461195 PPP2R1BP30154 601 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 VSNL1P62760 191 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 STX4Q12846 297 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 IFT88Q13099 833 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 UBAP2LQ14157 1087 aaKnown RBP21.02■□□□□ 0.96
TRAF4-207ENST00000461195 RPS19BP1Q86WX3 136 aaKnown RBP21.02■□□□□ 0.96
TRAF4-207ENST00000461195 SERPINI1Q99574 410 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 CDCP1Q9H5V8 836 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 PHF11Q9UIL8 331 aa21.02■□□□□ 0.96
TRAF4-207ENST00000461195 SMIM23A6NLE4 172 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 MAN1A2O60476 641 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 PRAMEF2O60811 474 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 SUPT7LO94864 414 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 SEMA3DO95025 777 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 SLU7O95391 586 aaKnown RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ETHE1O95571 254 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 IFNA16P05015 189 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 KRT15P19012 456 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 TSPAN8P19075 237 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 HSD17B3P37058 310 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 CLCN2P51788 898 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 CLCQ05315 142 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 SERTAD2Q14140 314 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 RASA2Q15283 850 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 NR6A1Q15406 480 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ELAVL1Q15717 326 aaKnown RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 INAQ16352 499 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ZNF678Q5SXM1 525 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 FAM180AQ6UWF9 173 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 GPR180Q86V85 440 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 SLC22A9Q8IVM8 553 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 TMEM132CQ8N3T6 1108 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 APCDD1LQ8NCL9 501 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 C7orf57Q8NEG2 295 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 MYRIPQ8NFW9 859 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 GRHL3Q8TE85 626 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 UTP23Q9BRU9 249 aaKnown RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ZNF717Q9BY31 904 aaPredicted RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ALOXE3Q9BYJ1 711 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 DEFB126Q9BYW3 111 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 ELOVL6Q9H5J4 265 aa21.01■□□□□ 0.95
TRAF4-207ENST00000461195 DDX31Q9H8H2 851 aaKnown RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 PPIEQ9UNP9 301 aaKnown RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 RP1L1Q8IWN7 2480 aaPredicted RBP21.01■□□□□ 0.95
TRAF4-207ENST00000461195 GABRR3A8MPY1 467 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 PPP6CO00743 305 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 CDK2AP1O14519 115 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 LDB3O75112 727 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 GLRA3O75311 464 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 EEDO75530 441 aaKnown RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 IMPDH1P20839 514 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 TLX1P31314 330 aaPredicted RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 BSGP35613 385 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 MRPL49Q13405 166 aaKnown RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 TUBA3CQ13748 450 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 UNC50Q53HI1 259 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 LETMD1Q6P1Q0 360 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 TUBA3EQ6PEY2 450 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 CYP20A1Q6UW02 462 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 EPS8L3Q8TE67 593 aaKnown RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 TRPC4APQ8TEL6 797 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 VMP1Q96GC9 406 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 TMEM237Q96Q45 408 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 RPF2Q9H7B2 306 aaKnown RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 LYARQ9NX58 379 aaKnown RBP21■□□□□ 0.95
TRAF4-207ENST00000461195 VTI1BQ9UEU0 232 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 CLCA3PQ9Y6N3 262 aa21■□□□□ 0.95
TRAF4-207ENST00000461195 A0A0A6YYD5 115 aa20.99■□□□□ 0.95
TRAF4-207ENST00000461195 TRBV11-1A0A0K0K1C0 115 aa20.99■□□□□ 0.95
TRAF4-207ENST00000461195 A0A1B0GTL3 188 aa20.99■□□□□ 0.95
TRAF4-207ENST00000461195 CLEC18AA5D8T8 446 aa20.99■□□□□ 0.95
TRAF4-207ENST00000461195 FOXO6A8MYZ6 492 aa20.99■□□□□ 0.95
TRAF4-207ENST00000461195 CDH16O75309 829 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms