RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CAPNS1P04632 268 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 NUDT7P0C024 238 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 ACADSP16219 412 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 ATP6V1C1P21283 382 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 CHI3L1P36222 383 aaPredicted RBP16.44■□□□□ 0.22
CDK11A-209ENST00000460465 CTSKP43235 329 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 AQP4P55087 323 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 BNIP3Q12983 259 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 HSPB3Q12988 150 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 SIM2Q14190 667 aaPredicted RBP16.44■□□□□ 0.22
CDK11A-209ENST00000460465 C16orf72Q14CZ0 275 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 SUZ12Q15022 739 aaKnown RBP16.44■□□□□ 0.22
CDK11A-209ENST00000460465 COX20Q5RI15 118 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 ENPP6Q6UWR7 440 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 C19orf47Q8N9M1 422 aaKnown RBP16.44■□□□□ 0.22
CDK11A-209ENST00000460465 NAF1Q96HR8 494 aaKnown RBP16.44■□□□□ 0.22
CDK11A-209ENST00000460465 TRAPPC9Q96Q05 1148 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 SPATA9Q9BWV2 254 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 FAM60AQ9NP50 221 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 AGPAT4Q9NRZ5 378 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 TMEM74BQ9NUR3 256 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 SNX8Q9Y5X2 465 aa16.44■□□□□ 0.22
CDK11A-209ENST00000460465 PGRMC2O15173 223 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 SERPINA1P01009 418 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 MT-ND1P03886 318 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 IL1RNP18510 177 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 UQCRC2P22695 453 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 FASP25445 335 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 CRATP43155 626 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 BNC1Q01954 994 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 CSTF1Q05048 431 aaKnown RBP16.43■□□□□ 0.22
CDK11A-209ENST00000460465 MAML2Q8IZL2 1156 aaPredicted RBP16.43■□□□□ 0.22
CDK11A-209ENST00000460465 CATSPER1Q8NEC5 780 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 OR52N2Q8NGI0 321 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 GAB3Q8WWW8 586 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 ZBED6CLQ96FA7 236 aaPredicted RBP16.43■□□□□ 0.22
CDK11A-209ENST00000460465 DCAF13Q9NV06 445 aaKnown RBP16.43■□□□□ 0.22
CDK11A-209ENST00000460465 RAPGEFL1Q9UHV5 662 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 USP34Q70CQ2 3546 aa16.43■□□□□ 0.22
CDK11A-209ENST00000460465 FAM149AA5PLN7 773 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 PROM1O43490 865 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 HCRTR1O43613 425 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 PPM1FP49593 454 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 COL9A2Q14055 689 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 DEFB134Q4QY38 66 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 FAM98BQ52LJ0 330 aaKnown RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ABHD13Q7L211 337 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ZNF655Q8N720 491 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SERINC2Q96SA4 455 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 UGT2B28Q9BY64 529 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ROGDIQ9GZN7 287 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 NEUROD4Q9HD90 331 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SLC35C2Q9NQQ7 365 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ACSS1Q9NUB1 689 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 MRPS2Q9Y399 296 aaKnown RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 RNF103-CHMP3A0A140T963 221 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SLC9B1P1A6NJY1 282 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 RPSAP08865 295 aaKnown RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 FCGR1AP12314 374 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ETFAP13804 333 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 GNSP15586 552 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 CDK9P50750 372 aaKnown RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 VSX2P58304 361 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 DEFB110Q30KQ9 67 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 C6orf132Q5T0Z8 1188 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SWT1Q5T5J6 900 aaKnown RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 FAM92BQ6ZTR7 304 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 RNF130Q86XS8 419 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SLC25A45Q8N413 288 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 CSNK1A1LQ8N752 337 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 ICA1LQ8NDH6 482 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 EME1Q96AY2 570 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 MAP3K3Q99759 626 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 CHID1Q9BWS9 393 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 NLNQ9BYT8 704 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 EPS8L2Q9H6S3 715 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 SIRT3Q9NTG7 399 aaPredicted RBP16.42■□□□□ 0.22
CDK11A-209ENST00000460465 MAP4K5Q9Y4K4 846 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 RNF215Q9Y6U7 377 aa16.42■□□□□ 0.22
CDK11A-209ENST00000460465 RHPN2P1A8MT19 583 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 ZSCAN9O15535 394 aaPredicted RBP16.41■□□□□ 0.22
CDK11A-209ENST00000460465 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
CDK11A-209ENST00000460465 PRKD3O94806 890 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 KRT75O95678 551 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 C9P02748 559 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 RAP2AP10114 183 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 BMP2P12643 396 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 CHRNB3Q05901 458 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 SHBQ15464 509 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 NKG7Q16617 165 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 LRRC23Q53EV4 343 aaPredicted RBP16.41■□□□□ 0.22
CDK11A-209ENST00000460465 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 ANKFN1Q8N957 763 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 MAL2Q969L2 176 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 SLC47A1Q96FL8 570 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 GLIPR2Q9H4G4 154 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 OLAHQ9NV23 265 aa16.41■□□□□ 0.22
CDK11A-209ENST00000460465 FAF1Q9UNN5 650 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms