RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PTX3P26022 381 aaPredicted RBP17.29■□□□□ 0.36
HPS3-202ENST00000460120 ACVR2AP27037 513 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 IL12RB1P42701 662 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 ST3GAL4Q11206 333 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 PDE7AQ13946 482 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 ELAVL3Q14576 367 aaKnown RBP17.29■□□□□ 0.36
HPS3-202ENST00000460120 C11orf74Q86VG3 221 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 RBM12BQ8IXT5 1001 aaKnown RBP17.29■□□□□ 0.36
HPS3-202ENST00000460120 KLHDC8AQ8IYD2 350 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 METTL2AQ96IZ6 378 aaKnown RBP17.29■□□□□ 0.36
HPS3-202ENST00000460120 PIP5K1AQ99755 562 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 WFDC6Q9BQY6 131 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 OR51E2Q9H255 320 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 NECTIN3Q9NQS3 549 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 PSORS1C1Q9UIG5 152 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 EDDM13A0A1B0GTR0 161 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 PSMD11O00231 422 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 OR1F1O43749 312 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 TBX6O95947 436 aaPredicted RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 BCAP31P51572 246 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 CLCNKAP51800 687 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 PTGES3Q15185 160 aaKnown RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 KLHL17Q6TDP4 642 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 ERN2Q76MJ5 926 aaKnown RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 MCFD2Q8NI22 146 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 IPCEF1Q8WWN9 437 aaPredicted RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 CHCHD6Q9BRQ6 235 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 YIPF4Q9BSR8 244 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 MIR1-1HGQ9H1L0 117 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 TBCCD1Q9NVR7 557 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 TEX10Q9NXF1 929 aaPredicted RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 POFUT2Q9Y2G5 429 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 TRBV4-1A0A0J9YWV2 114 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 DNAJB5O75953 348 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 CCNB2O95067 398 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 PCSK2P16519 638 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 GJA8P48165 433 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 SERPINB10P48595 397 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 PRKAG1P54619 331 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 LIM2P55344 173 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 EEF1A2Q05639 463 aaKnown RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 COLEC12Q5KU26 742 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 KRT78Q8N1N4 520 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 OR5D16Q8NGK9 328 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 GOT1L1Q8NHS2 421 aaPredicted RBP17.28■□□□□ 0.36
HPS3-202ENST00000460120 ZNF675Q8TD23 568 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 SUSD6Q92537 303 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 CXorf40BQ96DE9 158 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 RAD9AQ99638 391 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 PLXND1Q9Y4D7 1925 aa17.28■□□□□ 0.36
HPS3-202ENST00000460120 CLCA1A8K7I4 914 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 KIAA0355O15063 1070 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 ADRA2AP08913 450 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 CDH3P22223 829 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 MAPK9P45984 424 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 RPS3AP61247 264 aaKnown RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.36
HPS3-202ENST00000460120 MED22Q15528 200 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 GET4Q7L5D6 327 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 BCDIN3DQ7Z5W3 292 aaKnown RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 RHOXF1Q8NHV9 184 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 JPH3Q8WXH2 748 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 TMEM19Q96HH6 336 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 NMNAT1Q9HAN9 279 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 ABCB10Q9NRK6 738 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 MAPRE3Q9UPY8 281 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 NME6O75414 186 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 KRT75O95678 551 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 IFNW1P05000 195 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 ACP5P13686 325 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 ANXA8P13928 327 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 ZNF630Q2M218 657 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 MEX3DQ86XN8 651 aaKnown RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 ETFBKMTQ8IXQ9 262 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 B3GNT7Q8NFL0 401 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 WFIKKN2Q8TEU8 576 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 SLC38A4Q969I6 547 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 WDR34Q96EX3 536 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 DACH2Q96NX9 599 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 RSPO3Q9BXY4 272 aaPredicted RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 WDR12Q9GZL7 423 aaKnown RBP17.27■□□□□ 0.36
HPS3-202ENST00000460120 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 CCDC88CQ9P219 2028 aa17.27■□□□□ 0.36
HPS3-202ENST00000460120 RECKO95980 971 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 ARAFP10398 606 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 KELP23276 732 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 CNR2P34972 360 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 XCR1P46094 333 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 SEPHS1P49903 392 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 RELAQ04206 551 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 FADDQ13158 208 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 CARTPTQ16568 116 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 KHDRBS2Q5VWX1 349 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms