RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ITGAMP11215 1152 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 DRD2P14416 443 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 GPX2P18283 190 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ETV5P41161 510 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ETV1P50549 477 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 EFNB1P98172 346 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 CCINQ13939 588 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 TGIF1Q15583 401 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 CPSF6Q16630 551 aaKnown RBP eCLIP4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 PTPRNQ16849 979 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC36A2Q495M3 483 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 TRIM60Q495X7 471 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SDHAF4Q5VUM1 108 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ACSM5Q6NUN0 579 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 CD300LGQ6UXG3 332 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ETV3LQ6ZN32 361 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SAMD7Q7Z3H4 446 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ZZZ3Q8IYH5 903 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 IQCF1Q8N6M8 205 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 PAF1Q8N7H5 531 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 BOLLQ8N9W6 283 aaKnown RBP4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 OR10T2Q8NGX3 314 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 POF1BQ8WVV4 589 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 TADA1Q96BN2 335 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC47A1Q96FL8 570 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 IMP4Q96G21 291 aaKnown RBP4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 OR1F2PQ96R84 312 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ZBTB18Q99592 522 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 TMEM175Q9BSA9 504 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ACAD9Q9H845 621 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 FKRPQ9H9S5 495 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 LIN7BQ9HAP6 207 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC35C2Q9NQQ7 365 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ACER3Q9NUN7 267 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 ANKRD10Q9NXR5 420 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 PADI2Q9Y2J8 665 aa4.34□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A075B6Q4 140 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 TMEM200CA6NKL6 621 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SULT1C2O00338 296 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GAPDHSO14556 408 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RECQL4O94761 1208 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 CDRT1O95170 752 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 EPPINO95925 133 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GASTP01350 101 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GBAP04062 536 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RD3LP0DJH9 198 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 DRD5P21918 477 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GGT2P36268 569 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 PXNP49023 591 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SULT1E1P49888 294 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 LIM2P55344 173 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ABHD18Q0P651 414 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ST3GAL2Q16842 350 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 DGKKQ5KSL6 1271 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 CACHD1Q5VU97 1274 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 IL27RAQ6UWB1 636 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 QSOX2Q6ZRP7 698 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ZSWIM9Q86XI8 627 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 LURAP1LQ8IV03 231 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 LRRC17Q8N6Y2 441 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SIDT2Q8NBJ9 832 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RELL2Q8NC24 303 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 B3GALNT2Q8NCR0 500 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 TSPEARQ8WU66 669 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 HMGB4Q8WW32 186 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SMG7Q92540 1137 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GTPBP3Q969Y2 492 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC9A7Q96T83 725 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 NPAS1Q99742 590 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 AARSD1Q9BTE6 412 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 GTPBP2Q9BX10 602 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RBCK1Q9BYM8 510 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RANBP3Q9H6Z4 567 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 NIPAL2Q9H841 368 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SMURF1Q9HCE7 757 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 KRT84Q9NSB2 600 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 MAGEL2Q9UJ55 1249 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC6A5Q9Y345 797 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF175Q9Y473 711 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 IPPQ9Y573 584 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A0D9SEW6 157 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 C7orf66A4D0T2 115 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ANTXRLA6NF34 631 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 NPIPB8E9PQR5 432 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF670-ZNF695F2Z2N8 137 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ADAMDEC1O15204 470 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF254O75437 659 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 MED26O95402 600 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 URODP06132 367 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 LAMP1P11279 417 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 FCGR1AP12314 374 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 CPN2P22792 545 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 THBS2P35442 1172 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ADCYAP1R1P41586 468 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 BDKRB1P46663 353 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 EVX1P49640 407 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 CCR6P51684 374 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 KCNK10P57789 538 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms