RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 FAM72DQ6L9T8 149 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FAM159AQ6UWV7 190 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 USP43Q70EL4 1123 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ERASQ7Z444 233 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FAM72BQ86X60 149 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GRAMD2AQ8IUY3 354 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZNF843Q8N446 348 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 LRRC17Q8N6Y2 441 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 MRPL53Q96EL3 112 aaKnown RBP4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 GPR137Q96N19 417 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 PCDHB18PQ96TA0 734 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 SIX2Q9NPC8 291 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 CHST11Q9NPF2 352 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 OR6C2Q9NZP2 312 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 FLRT3Q9NZU0 649 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ATXN10Q9UBB4 475 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 SLC12A6Q9UHW9 1150 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ERVK-19Q9WJR5 959 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 NCKAP1Q9Y2A7 1128 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 ATG4BQ9Y4P1 393 aa4.48□□□□□ -1.69
HMGB1P26-201ENST00000452520 IL16Q14005 1332 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 A0A0G2JLW4 131 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 A0A1B0GUL7 405 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 BLOC1S5-TXNDC5H3BN57 136 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 XPO1O14980 1071 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 OGTO15294 1046 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 MAGEB3O15480 346 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SYT7O43581 403 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZNF821O75541 412 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 TOM1L1O75674 476 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 NGFP01138 241 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SP1P08047 785 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SERPINF2P08697 491 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 IGHV4-31P0DP07 118 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SFTPCP11686 197 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 DARSP14868 501 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 ANPEPP15144 967 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 DRD5P21918 477 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 PAICSP22234 425 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 LHCGRP22888 699 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 IL4RP24394 825 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 ITGA3P26006 1051 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 STIP1P31948 543 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CSTF2P33240 577 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 RFTN1Q14699 578 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 OPCMLQ14982 345 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 TAF13Q15543 124 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 KRTAP24-1Q3LI83 254 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CCDC152Q4G0S7 254 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 XKR3Q5GH77 459 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CFAP157Q5JU67 520 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 IL23RQ5VWK5 629 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 COX8CQ7Z4L0 72 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CPEB2Q7Z5Q1 589 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 ZNF444Q8N0Y2 327 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 TMEM99Q8N816 258 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 RNF149Q8NC42 400 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 U2AF1L4Q8WU68 220 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CTNNBL1Q8WYA6 563 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 TUBGCP3Q96CW5 907 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 RAB39BQ96DA2 213 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 GPA33Q99795 319 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 UBAC1Q9BSL1 405 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 FICDQ9BVA6 458 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 NUSAP1Q9BXS6 441 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 TRIM6Q9C030 488 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 DDX28Q9NUL7 540 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 GTSE1Q9NYZ3 720 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 CHRNA9Q9UGM1 479 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 MRPS2Q9Y399 296 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 C2CD2Q9Y426 696 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 ETV7Q9Y603 341 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 COLEC10Q9Y6Z7 277 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 R4GN57 208 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 NPC1L1Q9UHC9 1359 aa4.47□□□□□ -1.69
HMGB1P26-201ENST00000452520 SMCHD1A6NHR9 2005 aa4.46□□□□□ -1.69
HMGB1P26-201ENST00000452520 DISP3Q9P2K9 1392 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 A0A087WYN8 130 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 FPGTO14772 594 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 CSDE1O75534 798 aaKnown RBP4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 AMBPP02760 352 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 EDN1P05305 212 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 ASNSP08243 561 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 CD48P09326 243 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 IQCF3P0C7M6 154 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 PRSS56P0CW18 603 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 RRASP10301 218 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 CLUP10909 449 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 PTPN4P29074 926 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 ADRA1AP35348 466 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 CETN2P41208 172 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 HERV-K104P61576 105 aa4.46□□□□□ -1.7
HMGB1P26-201ENST00000452520 SPIBQ01892 262 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms