RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 GALNT4Q8N4A0 578 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 OR52N2Q8NGI0 321 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 UTP15Q8TED0 518 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 TMIGD2Q96BF3 282 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 RSRC1Q96IZ7 334 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 RHNO1Q9BSD3 238 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 FAM60AQ9NP50 221 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PHPT1Q9NRX4 125 aaPredicted RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 A0A1W2PPC1 479 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 A0A1W2PPC4 97 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 MAGEA13PA6NCF6 341 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TMX2-CTNND1H3BSU7 103 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 CCNDBP1O95273 360 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 ARAFP10398 606 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 COX7A2P14406 83 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 UGT2B7P16662 529 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 ATP5A1P25705 553 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 HSD17B2P37059 387 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 RELAQ04206 551 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SRSF5Q13243 272 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 DUSP7Q16829 419 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 OR4C11Q6IEV9 310 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SHQ1Q6PI26 577 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 DGAT2L6Q6ZPD8 337 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 OLIG3Q7RTU3 272 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SLC47A1Q96FL8 570 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TOE1Q96GM8 510 aaKnown RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 ADI1Q9BV57 179 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 BTBD2Q9BX70 525 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 A4GALTQ9NPC4 353 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 RLIMQ9NVW2 624 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 PADI4Q9UM07 663 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TMEM184BQ9Y519 407 aaPredicted RBP6.24□□□□□ -1.41
USP46-202ENST00000451218 CEPT1Q9Y6K0 416 aa6.24□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3DA0A087WVF3 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3IA0A087WXS9 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3EA0A087X179 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3KA0A087X1G2 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3FA6NER0 549 aaPredicted RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3LB9A6J9 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 SEMA4FO95754 770 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 HPRP00739 348 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3HP0C7X1 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 F3P13726 295 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 PCSK2P16519 638 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 AHRP35869 848 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ASMTP46597 345 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ALDH3A2P51648 485 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 YPEL5P62699 121 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 CYP4F2P78329 520 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 MRPS35P82673 323 aaKnown RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 LSM11P83369 360 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP46-202ENST00000451218 ZP2Q05996 745 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ACSM2AQ08AH3 577 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 CCDC6Q16204 474 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ACSM2BQ68CK6 577 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3GQ6DHY5 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3CQ6IPX1 549 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TRIM73Q86UV7 250 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TBC1D3Q8IZP1 549 aaPredicted RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 OR5AK3PQ8NH89 298 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 MIPOL1Q8TD10 442 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 FIG4Q92562 907 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 MSANTD3Q96H12 275 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 SLC6A18Q96N87 628 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 PANX1Q96RD7 426 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 SEPHS2Q99611 448 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 OSBPL11Q9BXB4 747 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ANKRA2Q9H9E1 313 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 BATF3Q9NR55 127 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 DNAAF2Q9NVR5 837 aaKnown RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 V9GYQ6 96 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 CENPVL1A0A0U1RR11 272 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 J3KTA2 159 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 CYR61O00622 381 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TPST1O60507 370 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 MITFO75030 526 aaPredicted RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 AIFM1O95831 613 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 PSMA4P25789 261 aaKnown RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 PCSK6P29122 969 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 XCR1P46094 333 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 HMGA2P52926 109 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 EFNB1P98172 346 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 GTF2H3Q13889 308 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 RUNX2Q13950 521 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 LAPTM4AQ15012 233 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 GPR19Q15760 415 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 WDR92Q96MX6 357 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 TRNAU1APQ9NX07 287 aaKnown RBP6.23□□□□□ -1.41
USP46-202ENST00000451218 PRR23AA6NEV1 266 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 ADAM10O14672 748 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 SLC16A6O15403 523 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 CPNE6O95741 557 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 SLC35G4P0C7Q5 338 aa6.23□□□□□ -1.41
USP46-202ENST00000451218 PRKACGP22612 351 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms