RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SYTL3Q4VX76 610 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SPIN4Q56A73 249 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GPRC6AQ5T6X5 926 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 STRIP1Q5VSL9 837 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ETV3LQ6ZN32 361 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 KCNMB4Q86W47 210 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 WDTC1Q8N5D0 677 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 OR2T12Q8NG77 320 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 OR5M9Q8NGP3 310 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 RXFP4Q8TDU9 374 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SNX33Q8WV41 574 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 TSNAXQ99598 290 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GABARAPL3Q9BY60 117 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GSTO2Q9H4Y5 243 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 DBNDD1Q9H9R9 158 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 DCAF13Q9NV06 445 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 POLLQ9UGP5 575 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 UTS2RQ9UKP6 389 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PCDHGA6Q9Y5G7 932 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 NUBP2Q9Y5Y2 271 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PLSCR5A0PG75 271 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 OR6C75A6NL08 312 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF879B4DU55 563 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 NEDD8-MDP1E9PL57 170 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ARVCFO00192 962 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 FFAR3O14843 346 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GPR42O15529 346 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 RP2O75695 350 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 CKBP12277 381 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 NFKB1P19838 968 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 FPR1P21462 350 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 CRYBB2P43320 205 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PXNP49023 591 aaPredicted RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 POLR2JP52435 117 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 RAG2P55895 527 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 RAB2AP61019 212 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 MLLT1Q03111 559 aaPredicted RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ILF3Q12906 894 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 HNRNPA0Q13151 305 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GPR176Q14439 515 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF57Q68EA5 555 aaPredicted RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PUSL1Q8N0Z8 303 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF511Q8NB15 262 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 CA5BP1Q8WTZ4 195 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 FAM162AQ96A26 154 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 MEGF10Q96KG7 1140 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF583Q96ND8 569 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SIK2Q9H0K1 926 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SLC25A32Q9H2D1 315 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 CRISPLD1Q9H336 500 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SUV39H2Q9H5I1 410 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 MINDY3Q9H8M7 445 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 AKAP7Q9P0M2 348 aaPredicted RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 SLAMF8Q9P0V8 285 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 FEM1BQ9UK73 627 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 MRTO4Q9UKD2 239 aaKnown RBP10.3□□□□□ -0.76
LINC00342-202ENST00000448494 IKZF3Q9UKT9 509 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 CA5BQ9Y2D0 317 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ASB1Q9Y576 335 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PCDHGC4Q9Y5F7 938 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PCDHGA5Q9Y5G8 931 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
LINC00342-202ENST00000448494 ACOD1A6NK06 481 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 RFPL4AA6NLU0 287 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 ERI2A8K979 691 aaKnown RBP10.29□□□□□ -0.76
LINC00342-202ENST00000448494 MYO1GB0I1T2 1018 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 USP17L10C9JJH3 530 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 RFPL4AL1F8VTS6 287 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 H7C0S8 307 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 UBFD1O14562 309 aaKnown RBP10.29□□□□□ -0.76
LINC00342-202ENST00000448494 TXNL1O43396 289 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 SLC22A3O75751 556 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 STBD1O95210 358 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 PGK1P00558 417 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 SERPINA3P01011 423 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 PEPDP12955 493 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 HGFP14210 728 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 GABRB1P18505 474 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 POU3F2P20265 443 aaPredicted RBP10.29□□□□□ -0.76
LINC00342-202ENST00000448494 DNAJA1P31689 397 aaKnown RBP10.29□□□□□ -0.76
LINC00342-202ENST00000448494 CASP2P42575 452 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 PTGER2P43116 358 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 KRT33BQ14525 404 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 CYB5R2Q6BCY4 276 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 CNIH2Q6PI25 160 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 NAA40Q86UY6 237 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 PGBD5Q8N414 524 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 OR10H5Q8NGA6 315 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 PCDH19Q8TAB3 1148 aa10.29□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms