RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OMPP47874 163 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 ILF3Q12906 894 aaKnown RBP eCLIP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 PNCKQ6P2M8 343 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 TRIM46Q7Z4K8 759 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 C6orf120Q7Z4R8 191 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 UBTD2Q8WUN7 234 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 ASB11Q8WXH4 323 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 OSTF1Q92882 214 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 MOAP1Q96BY2 351 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 PRAP1Q96NZ9 151 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 CWH43Q9H720 699 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 TMEM138Q9NPI0 162 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 SOBPA7XYQ1 873 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 FAM155AB1AL88 458 aaPredicted RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 VEGFDO43915 354 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 GGT2P36268 569 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 ADARB1P78563 741 aaKnown RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 SLC27A4Q6P1M0 643 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 PAMR1Q6UXH9 720 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 GPR151Q8TDV0 419 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 C16orf78Q8WTQ4 265 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 EGLN2Q96KS0 407 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 TEX37Q96LM6 180 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 MARCH7Q9H992 704 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 PRAMEF33A0A0G2JMD5 474 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 FAM47E-STBD1D6RA91 191 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 SLC31A1O15431 190 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 PRAMEF10O60809 474 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 RCBTB2O95199 551 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 AOAHP28039 575 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 ERVK-21P61565 698 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 SLC13A2Q13183 592 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 GGTA1PQ4G0N0 100 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 RNASE12Q5GAN4 147 aaKnown RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 LMLNQ96KR4 655 aa15.95■□□□□ 0.14
TCOF1-206ENST00000445265 BARD1Q99728 777 aaKnown RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 HEMK1Q9Y5R4 338 aaPredicted RBP15.95■□□□□ 0.14
TCOF1-206ENST00000445265 CD97P48960 835 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 PITPNAQ00169 270 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 GRSF1Q12849 480 aaKnown RBP eCLIP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 HNRNPA0Q13151 305 aaKnown RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF513Q8N8E2 541 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CHST14Q8NCH0 376 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 GNPDA2Q8TDQ7 276 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CCDC32Q9BV29 185 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF385DQ9H6B1 395 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 GPN1Q9HCN4 374 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ELOVL2Q9NXB9 296 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 GRIP1Q9Y3R0 1128 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 KRBA1A5PL33 1030 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 FAM26DQ5JW98 314 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CPXM2Q8N436 756 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 RNF38Q9H0F5 515 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 DKK3Q9UBP4 350 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 STOML2Q9UJZ1 356 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ACSL5Q9ULC5 683 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 POLR1DQ9Y2S0 133 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 H0YC42 278 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 WBP4O75554 376 aaKnown RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 REM1O75628 298 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 JUNBP17275 347 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 SPCS2Q15005 226 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 LIPKQ5VXJ0 399 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 OR8H1Q8NGG4 311 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 KLK6Q92876 244 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 C17orf62Q9BQA9 187 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 RMI1Q9H9A7 625 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 TRIM36Q9NQ86 728 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 PRKAB1Q9Y478 270 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CPSF4LA6NMK7 179 aaKnown RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 SLC25A12O75746 678 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CH25HO95992 272 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ZXDBP98169 803 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 TOR1AIP1Q5JTV8 583 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 JAZF1Q86VZ6 243 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ZFP90Q8TF47 636 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 MCCC1Q96RQ3 725 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 P2RY13Q9BPV8 354 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 C1QTNF3Q9BXJ4 246 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 CPEB1Q9BZB8 566 aaKnown RBP15.94■□□□□ 0.14
TCOF1-206ENST00000445265 TNFRSF12AQ9NP84 129 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 RNF186Q9NXI6 227 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 HSFX1Q9UBD0 423 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 ABCG2Q9UNQ0 655 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 FOCADQ5VW36 1801 aa15.94■□□□□ 0.14
TCOF1-206ENST00000445265 OR6C70A6NIJ9 312 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 ADAMTS4O75173 837 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF821O75541 412 aaPredicted RBP15.93■□□□□ 0.14
TCOF1-206ENST00000445265 RASGRP1O95267 797 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 OR12D1P0DN82 309 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 MGAT3Q09327 533 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 ADAM15Q13444 863 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 LIN54Q6MZP7 749 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 B3GNT8Q7Z7M8 397 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 PARGQ86W56 976 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 RBM18Q96H35 190 aaKnown RBP15.93■□□□□ 0.14
TCOF1-206ENST00000445265 TMED9Q9BVK6 235 aa15.93■□□□□ 0.14
TCOF1-206ENST00000445265 PCDHGB7Q9Y5F8 929 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms